Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC010997.5-201ENST00000609182 354 ntBASIC20.05■□□□□ 0.8
TMEM54Q969K7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM54Q969K7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMEM54Q969K7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM54Q969K7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM54Q969K7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM54Q969K7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM54Q969K7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM54Q969K7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM54Q969K7 TSPY9P-201ENST00000440215 945 ntBASIC20.04■□□□□ 0.8
TMEM54Q969K7 TSPY11P-201ENST00000442607 1045 ntBASIC20.04■□□□□ 0.8
TMEM54Q969K7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TMEM54Q969K7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM54Q969K7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM54Q969K7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM54Q969K7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM54Q969K7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM54Q969K7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM54Q969K7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM54Q969K7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM54Q969K7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM54Q969K7 UNC93B8-201ENST00000511903 705 ntBASIC20.03■□□□□ 0.8
TMEM54Q969K7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM54Q969K7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.03■□□□□ 0.8
TMEM54Q969K7 ANOS2P-203ENST00000472227 1816 ntBASIC20.03■□□□□ 0.8
TMEM54Q969K7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM54Q969K7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM54Q969K7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM54Q969K7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM54Q969K7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM54Q969K7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.02■□□□□ 0.8
TMEM54Q969K7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM54Q969K7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM54Q969K7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM54Q969K7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.02■□□□□ 0.79
TMEM54Q969K7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM54Q969K7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.02■□□□□ 0.79
TMEM54Q969K7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM54Q969K7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM54Q969K7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM54Q969K7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM54Q969K7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TMEM54Q969K7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM54Q969K7 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.01■□□□□ 0.79
TMEM54Q969K7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.01■□□□□ 0.79
TMEM54Q969K7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.01■□□□□ 0.79
TMEM54Q969K7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TMEM54Q969K7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM54Q969K7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM54Q969K7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM54Q969K7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM54Q969K7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM54Q969K7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM54Q969K7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20■□□□□ 0.79
TMEM54Q969K7 GUSBP5-201ENST00000418136 578 ntBASIC20■□□□□ 0.79
TMEM54Q969K7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20■□□□□ 0.79
TMEM54Q969K7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20■□□□□ 0.79
TMEM54Q969K7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20■□□□□ 0.79
TMEM54Q969K7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20■□□□□ 0.79
TMEM54Q969K7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM54Q969K7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM54Q969K7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM54Q969K7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20■□□□□ 0.79
TMEM54Q969K7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM54Q969K7 AC092068.2-201ENST00000590491 1708 ntBASIC19.99■□□□□ 0.79
TMEM54Q969K7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM54Q969K7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM54Q969K7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM54Q969K7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM54Q969K7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM54Q969K7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM54Q969K7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM54Q969K7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM54Q969K7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TMEM54Q969K7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM54Q969K7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM54Q969K7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM54Q969K7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TMEM54Q969K7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM54Q969K7 DUSP8P5-201ENST00000422884 1815 ntBASIC19.98■□□□□ 0.79
TMEM54Q969K7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TMEM54Q969K7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM54Q969K7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM54Q969K7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM54Q969K7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM54Q969K7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM54Q969K7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
TMEM54Q969K7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.97■□□□□ 0.79
TMEM54Q969K7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TMEM54Q969K7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM54Q969K7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms