Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 BHLHE23-202ENST00000612929 1109 ntBASIC20.37■□□□□ 0.85
PTP4A1Q93096 AC074183.2-201ENST00000623112 922 ntBASIC20.37■□□□□ 0.85
PTP4A1Q93096 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTP4A1Q93096 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTP4A1Q93096 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PTP4A1Q93096 AC131274.2-201ENST00000580697 1507 ntBASIC20.37■□□□□ 0.85
PTP4A1Q93096 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.36■□□□□ 0.85
PTP4A1Q93096 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.36■□□□□ 0.85
PTP4A1Q93096 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PTP4A1Q93096 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A1Q93096 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A1Q93096 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A1Q93096 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.36■□□□□ 0.85
PTP4A1Q93096 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A1Q93096 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.36■□□□□ 0.85
PTP4A1Q93096 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A1Q93096 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTP4A1Q93096 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A1Q93096 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.35■□□□□ 0.85
PTP4A1Q93096 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A1Q93096 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A1Q93096 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A1Q93096 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A1Q93096 AL033527.3-201ENST00000566366 1196 ntBASIC20.35■□□□□ 0.85
PTP4A1Q93096 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.35■□□□□ 0.85
PTP4A1Q93096 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.35■□□□□ 0.85
PTP4A1Q93096 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A1Q93096 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A1Q93096 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTP4A1Q93096 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
PTP4A1Q93096 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTP4A1Q93096 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTP4A1Q93096 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PTP4A1Q93096 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.34■□□□□ 0.85
PTP4A1Q93096 ALDH1A3-203ENST00000557963 1670 ntBASIC20.34■□□□□ 0.85
PTP4A1Q93096 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.34■□□□□ 0.85
PTP4A1Q93096 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTP4A1Q93096 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.34■□□□□ 0.85
PTP4A1Q93096 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTP4A1Q93096 EP400NL-214ENST00000641289 2402 ntBASIC20.34■□□□□ 0.85
PTP4A1Q93096 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A1Q93096 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A1Q93096 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A1Q93096 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A1Q93096 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PTP4A1Q93096 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
PTP4A1Q93096 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.33■□□□□ 0.85
PTP4A1Q93096 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.33■□□□□ 0.85
PTP4A1Q93096 AC011551.1-201ENST00000614101 683 ntBASIC20.33■□□□□ 0.85
PTP4A1Q93096 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTP4A1Q93096 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTP4A1Q93096 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTP4A1Q93096 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PTP4A1Q93096 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.32■□□□□ 0.84
PTP4A1Q93096 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.32■□□□□ 0.84
PTP4A1Q93096 AC019171.1-201ENST00000601251 1056 ntBASIC20.32■□□□□ 0.84
PTP4A1Q93096 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.32■□□□□ 0.84
PTP4A1Q93096 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.32■□□□□ 0.84
PTP4A1Q93096 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.32■□□□□ 0.84
PTP4A1Q93096 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTP4A1Q93096 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PTP4A1Q93096 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A1Q93096 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A1Q93096 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A1Q93096 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A1Q93096 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A1Q93096 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A1Q93096 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PTP4A1Q93096 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A1Q93096 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.31■□□□□ 0.84
PTP4A1Q93096 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A1Q93096 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.31■□□□□ 0.84
PTP4A1Q93096 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
PTP4A1Q93096 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTP4A1Q93096 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PTP4A1Q93096 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PTP4A1Q93096 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PTP4A1Q93096 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A1Q93096 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A1Q93096 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PTP4A1Q93096 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A1Q93096 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.3■□□□□ 0.84
PTP4A1Q93096 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A1Q93096 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTP4A1Q93096 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PTP4A1Q93096 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A1Q93096 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A1Q93096 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A1Q93096 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A1Q93096 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms