Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
RPGRQ92834 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RPGRQ92834 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.22■■■□□ 2.11
RPGRQ92834 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RPGRQ92834 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.22■■■□□ 2.11
RPGRQ92834 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RPGRQ92834 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RPGRQ92834 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.21■■■□□ 2.11
RPGRQ92834 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RPGRQ92834 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RPGRQ92834 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
RPGRQ92834 AC034268.1-201ENST00000441047 882 ntBASIC28.21■■■□□ 2.11
RPGRQ92834 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
RPGRQ92834 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.21■■■□□ 2.11
RPGRQ92834 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
RPGRQ92834 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RPGRQ92834 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
RPGRQ92834 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
RPGRQ92834 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RPGRQ92834 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.2■■■□□ 2.1
RPGRQ92834 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RPGRQ92834 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RPGRQ92834 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RPGRQ92834 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.19■■■□□ 2.1
RPGRQ92834 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RPGRQ92834 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
RPGRQ92834 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.19■■■□□ 2.1
RPGRQ92834 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RPGRQ92834 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
RPGRQ92834 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RPGRQ92834 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RPGRQ92834 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.18■■■□□ 2.1
RPGRQ92834 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.18■■■□□ 2.1
RPGRQ92834 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.18■■■□□ 2.1
RPGRQ92834 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.18■■■□□ 2.1
RPGRQ92834 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RPGRQ92834 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RPGRQ92834 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
RPGRQ92834 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RPGRQ92834 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.18■■■□□ 2.1
RPGRQ92834 TSPY26P-201ENST00000476365 1326 ntBASIC28.18■■■□□ 2.1
RPGRQ92834 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RPGRQ92834 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.17■■■□□ 2.1
RPGRQ92834 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RPGRQ92834 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RPGRQ92834 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC28.17■■■□□ 2.1
RPGRQ92834 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RPGRQ92834 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RPGRQ92834 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RPGRQ92834 HLA-L-211ENST00000482052 1765 ntBASIC28.16■■■□□ 2.1
RPGRQ92834 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RPGRQ92834 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
RPGRQ92834 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.16■■■□□ 2.1
RPGRQ92834 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
RPGRQ92834 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RPGRQ92834 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RPGRQ92834 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RPGRQ92834 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.15■■■□□ 2.1
RPGRQ92834 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RPGRQ92834 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.15■■■□□ 2.1
RPGRQ92834 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.15■■■□□ 2.1
RPGRQ92834 YBX1P1-201ENST00000445822 960 ntBASIC28.15■■■□□ 2.1
RPGRQ92834 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RPGRQ92834 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.15■■■□□ 2.1
RPGRQ92834 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.15■■■□□ 2.1
RPGRQ92834 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.15■■■□□ 2.1
RPGRQ92834 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RPGRQ92834 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
RPGRQ92834 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RPGRQ92834 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.14■■■□□ 2.1
RPGRQ92834 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.14■■■□□ 2.1
RPGRQ92834 SLC47A1P1-202ENST00000449666 945 ntBASIC28.14■■■□□ 2.1
RPGRQ92834 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.14■■■□□ 2.1
RPGRQ92834 AC145676.1-201ENST00000514988 2004 ntBASIC28.14■■■□□ 2.09
RPGRQ92834 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
RPGRQ92834 ALDH1A3-203ENST00000557963 1670 ntBASIC28.13■■■□□ 2.09
RPGRQ92834 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.13■■■□□ 2.09
RPGRQ92834 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
RPGRQ92834 AC141586.4-201ENST00000624558 1573 ntBASIC28.13■■■□□ 2.09
RPGRQ92834 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.13■■■□□ 2.09
RPGRQ92834 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RPGRQ92834 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RPGRQ92834 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.13■■■□□ 2.09
RPGRQ92834 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RPGRQ92834 AC091060.1-201ENST00000623524 1766 ntBASIC28.13■■■□□ 2.09
RPGRQ92834 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
RPGRQ92834 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
RPGRQ92834 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.13■■■□□ 2.09
RPGRQ92834 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
RPGRQ92834 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.12■■■□□ 2.09
RPGRQ92834 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RPGRQ92834 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.12■■■□□ 2.09
RPGRQ92834 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.12■■■□□ 2.09
RPGRQ92834 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RPGRQ92834 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.12■■■□□ 2.09
RPGRQ92834 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.12■■■□□ 2.09
RPGRQ92834 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.12■■■□□ 2.09
RPGRQ92834 IKBKGP1-201ENST00000612193 1073 ntBASIC28.12■■■□□ 2.09
RPGRQ92834 AL031602.1-201ENST00000633169 911 ntBASIC28.12■■■□□ 2.09
RPGRQ92834 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms