Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC30.06■■■□□ 2.4
RAPGEF4Q8WZA2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RAPGEF4Q8WZA2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RAPGEF4Q8WZA2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RAPGEF4Q8WZA2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
RAPGEF4Q8WZA2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.05■■■□□ 2.4
RAPGEF4Q8WZA2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.05■■■□□ 2.4
RAPGEF4Q8WZA2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RAPGEF4Q8WZA2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.04■■■□□ 2.4
RAPGEF4Q8WZA2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RAPGEF4Q8WZA2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RAPGEF4Q8WZA2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RAPGEF4Q8WZA2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RAPGEF4Q8WZA2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RAPGEF4Q8WZA2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
RAPGEF4Q8WZA2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RAPGEF4Q8WZA2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC30.03■■■□□ 2.4
RAPGEF4Q8WZA2 pRNA.6-201ENST00000610482 90 ntBASIC30.03■■■□□ 2.4
RAPGEF4Q8WZA2 pRNA.5-201ENST00000612139 90 ntBASIC30.03■■■□□ 2.4
RAPGEF4Q8WZA2 pRNA.11-201ENST00000618423 90 ntBASIC30.03■■■□□ 2.4
RAPGEF4Q8WZA2 pRNA.13-201ENST00000619112 90 ntBASIC30.03■■■□□ 2.4
RAPGEF4Q8WZA2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RAPGEF4Q8WZA2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 SP2-202ENST00000613139 908 ntTSL 5 BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RAPGEF4Q8WZA2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.4
RAPGEF4Q8WZA2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.4
RAPGEF4Q8WZA2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAPGEF4Q8WZA2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAPGEF4Q8WZA2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAPGEF4Q8WZA2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RAPGEF4Q8WZA2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30■■■□□ 2.39
RAPGEF4Q8WZA2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
RAPGEF4Q8WZA2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RAPGEF4Q8WZA2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC30■■■□□ 2.39
RAPGEF4Q8WZA2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
RAPGEF4Q8WZA2 ALDH1A3-203ENST00000557963 1670 ntBASIC29.99■■■□□ 2.39
RAPGEF4Q8WZA2 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.99■■■□□ 2.39
RAPGEF4Q8WZA2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.99■■■□□ 2.39
RAPGEF4Q8WZA2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RAPGEF4Q8WZA2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.99■■■□□ 2.39
RAPGEF4Q8WZA2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RAPGEF4Q8WZA2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RAPGEF4Q8WZA2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RAPGEF4Q8WZA2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RAPGEF4Q8WZA2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RAPGEF4Q8WZA2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.98■■■□□ 2.39
RAPGEF4Q8WZA2 AC126544.1-201ENST00000580842 1059 ntBASIC29.98■■■□□ 2.39
RAPGEF4Q8WZA2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
RAPGEF4Q8WZA2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.98■■■□□ 2.39
RAPGEF4Q8WZA2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RAPGEF4Q8WZA2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
RAPGEF4Q8WZA2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC29.97■■■□□ 2.39
RAPGEF4Q8WZA2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RAPGEF4Q8WZA2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RAPGEF4Q8WZA2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
RAPGEF4Q8WZA2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
RAPGEF4Q8WZA2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
RAPGEF4Q8WZA2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RAPGEF4Q8WZA2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC29.96■■■□□ 2.39
RAPGEF4Q8WZA2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
RAPGEF4Q8WZA2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.95■■■□□ 2.39
RAPGEF4Q8WZA2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.95■■■□□ 2.39
RAPGEF4Q8WZA2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.95■■■□□ 2.39
RAPGEF4Q8WZA2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
RAPGEF4Q8WZA2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
RAPGEF4Q8WZA2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.95■■■□□ 2.38
RAPGEF4Q8WZA2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.95■■■□□ 2.38
RAPGEF4Q8WZA2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.95■■■□□ 2.38
RAPGEF4Q8WZA2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
RAPGEF4Q8WZA2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RAPGEF4Q8WZA2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RAPGEF4Q8WZA2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RAPGEF4Q8WZA2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RAPGEF4Q8WZA2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.94■■■□□ 2.38
RAPGEF4Q8WZA2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.94■■■□□ 2.38
RAPGEF4Q8WZA2 AC141586.4-201ENST00000624558 1573 ntBASIC29.94■■■□□ 2.38
RAPGEF4Q8WZA2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.93■■■□□ 2.38
RAPGEF4Q8WZA2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RAPGEF4Q8WZA2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.93■■■□□ 2.38
RAPGEF4Q8WZA2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RAPGEF4Q8WZA2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
RAPGEF4Q8WZA2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RAPGEF4Q8WZA2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.92■■■□□ 2.38
RAPGEF4Q8WZA2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RAPGEF4Q8WZA2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RAPGEF4Q8WZA2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.91■■■□□ 2.38
RAPGEF4Q8WZA2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RAPGEF4Q8WZA2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
RAPGEF4Q8WZA2 TSPY26P-201ENST00000476365 1326 ntBASIC29.91■■■□□ 2.38
RAPGEF4Q8WZA2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms