Protein–RNA interactions for Protein: Q8TA94

ZNF563, Zinc finger protein 563, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563Q8TA94 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ZNF563Q8TA94 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
ZNF563Q8TA94 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF563Q8TA94 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF563Q8TA94 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 MIR4787-201ENST00000607364 84 ntBASIC20.74■□□□□ 0.91
ZNF563Q8TA94 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF563Q8TA94 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF563Q8TA94 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF563Q8TA94 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 AC092028.1-203ENST00000608262 953 ntBASIC20.71■□□□□ 0.91
ZNF563Q8TA94 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZNF563Q8TA94 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF563Q8TA94 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF563Q8TA94 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF563Q8TA94 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF563Q8TA94 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF563Q8TA94 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF563Q8TA94 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF563Q8TA94 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF563Q8TA94 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF563Q8TA94 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF563Q8TA94 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 MTDHP2-201ENST00000601468 714 ntBASIC20.68■□□□□ 0.9
ZNF563Q8TA94 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF563Q8TA94 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZNF563Q8TA94 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF563Q8TA94 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms