Protein–RNA interactions for Protein: Q8NHV9

RHOXF1, Rhox homeobox family member 1, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1Q8NHV9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RHOXF1Q8NHV9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RHOXF1Q8NHV9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHOXF1Q8NHV9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHOXF1Q8NHV9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RHOXF1Q8NHV9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHOXF1Q8NHV9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RHOXF1Q8NHV9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RHOXF1Q8NHV9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHOXF1Q8NHV9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.62■□□□□ 0.89
RHOXF1Q8NHV9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.62■□□□□ 0.89
RHOXF1Q8NHV9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 RAP2CP1-202ENST00000605179 643 ntBASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RHOXF1Q8NHV9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 AC090877.2-201ENST00000558441 1738 ntBASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 AC242852.2-201ENST00000615738 1807 ntBASIC20.6■□□□□ 0.89
RHOXF1Q8NHV9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.59■□□□□ 0.89
RHOXF1Q8NHV9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 AC026202.3-201ENST00000600805 1127 ntBASIC20.58■□□□□ 0.89
RHOXF1Q8NHV9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.58■□□□□ 0.88
RHOXF1Q8NHV9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RHOXF1Q8NHV9 ESRRAP2-201ENST00000418437 1549 ntBASIC20.58■□□□□ 0.88
RHOXF1Q8NHV9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.57■□□□□ 0.88
RHOXF1Q8NHV9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RHOXF1Q8NHV9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RHOXF1Q8NHV9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RHOXF1Q8NHV9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.57■□□□□ 0.88
RHOXF1Q8NHV9 AC007029.1-201ENST00000604183 313 ntBASIC20.57■□□□□ 0.88
RHOXF1Q8NHV9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOXF1Q8NHV9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RHOXF1Q8NHV9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RHOXF1Q8NHV9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RHOXF1Q8NHV9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF1Q8NHV9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RHOXF1Q8NHV9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.55■□□□□ 0.88
RHOXF1Q8NHV9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF1Q8NHV9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RHOXF1Q8NHV9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
RHOXF1Q8NHV9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
RHOXF1Q8NHV9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms