Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF439Q8NDP4 ALDH1A3-203ENST00000557963 1670 ntBASIC18.69■□□□□ 0.58
ZNF439Q8NDP4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF439Q8NDP4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF439Q8NDP4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNF439Q8NDP4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ZNF439Q8NDP4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF439Q8NDP4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF439Q8NDP4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF439Q8NDP4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ZNF439Q8NDP4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 AC004448.1-201ENST00000458332 883 ntBASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 AL031848.2-201ENST00000607670 837 ntBASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF439Q8NDP4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF439Q8NDP4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZNF439Q8NDP4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.67■□□□□ 0.58
ZNF439Q8NDP4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF439Q8NDP4 AC137630.3-201ENST00000607245 391 ntBASIC18.67■□□□□ 0.58
ZNF439Q8NDP4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF439Q8NDP4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF439Q8NDP4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF439Q8NDP4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 DUSP8P5-201ENST00000422884 1815 ntBASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF439Q8NDP4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
ZNF439Q8NDP4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF439Q8NDP4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF439Q8NDP4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
ZNF439Q8NDP4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms