Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIML2Q8N7C3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIML2Q8N7C3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIML2Q8N7C3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 EP400NL-214ENST00000641289 2402 ntBASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIML2Q8N7C3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TRIML2Q8N7C3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIML2Q8N7C3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIML2Q8N7C3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIML2Q8N7C3 AL161729.1-201ENST00000604104 1402 ntBASIC21.75■■□□□ 1.07
TRIML2Q8N7C3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
TRIML2Q8N7C3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIML2Q8N7C3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIML2Q8N7C3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TRIML2Q8N7C3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIML2Q8N7C3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIML2Q8N7C3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIML2Q8N7C3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TRIML2Q8N7C3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIML2Q8N7C3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIML2Q8N7C3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIML2Q8N7C3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIML2Q8N7C3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 HSD17B1P1-201ENST00000590052 955 ntBASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIML2Q8N7C3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 AC233723.2-201ENST00000623798 2106 ntBASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIML2Q8N7C3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRIML2Q8N7C3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 LONRF2P2-201ENST00000439212 571 ntBASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 U85056.1-201ENST00000616429 682 ntBASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIML2Q8N7C3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 AC129492.7-201ENST00000622992 756 ntBASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIML2Q8N7C3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms