Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.97■■□□□ 1.43
SCN4BQ8IWT1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 LINC01124-201ENST00000409786 2117 ntBASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCN4BQ8IWT1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SCN4BQ8IWT1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCN4BQ8IWT1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.95■■□□□ 1.42
SCN4BQ8IWT1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.95■■□□□ 1.42
SCN4BQ8IWT1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SCN4BQ8IWT1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCN4BQ8IWT1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCN4BQ8IWT1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
SCN4BQ8IWT1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCN4BQ8IWT1 AL136162.1-201ENST00000607711 1078 ntBASIC23.94■■□□□ 1.42
SCN4BQ8IWT1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SCN4BQ8IWT1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCN4BQ8IWT1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCN4BQ8IWT1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 AC099791.2-201ENST00000605725 427 ntBASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.93■■□□□ 1.42
SCN4BQ8IWT1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.92■■□□□ 1.42
SCN4BQ8IWT1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCN4BQ8IWT1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCN4BQ8IWT1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.91■■□□□ 1.42
SCN4BQ8IWT1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
SCN4BQ8IWT1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCN4BQ8IWT1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.91■■□□□ 1.42
SCN4BQ8IWT1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 C17orf82-201ENST00000623772 1530 ntBASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 AL139125.2-201ENST00000623134 1869 ntBASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 AC005837.3-201ENST00000612163 286 ntBASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 AC106739.1-201ENST00000617035 715 ntBASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.9■■□□□ 1.42
SCN4BQ8IWT1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCN4BQ8IWT1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.89■■□□□ 1.42
SCN4BQ8IWT1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
SCN4BQ8IWT1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.89■■□□□ 1.41
SCN4BQ8IWT1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCN4BQ8IWT1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCN4BQ8IWT1 SYT6-210ENST00000641643 1587 ntBASIC23.89■■□□□ 1.41
SCN4BQ8IWT1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.89■■□□□ 1.41
SCN4BQ8IWT1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SCN4BQ8IWT1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCN4BQ8IWT1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SCN4BQ8IWT1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCN4BQ8IWT1 AC135279.3-201ENST00000610945 1311 ntBASIC23.88■■□□□ 1.41
SCN4BQ8IWT1 AC024257.2-201ENST00000549699 147 ntBASIC23.88■■□□□ 1.41
SCN4BQ8IWT1 DUX4L19-201ENST00000557448 1267 ntBASIC23.88■■□□□ 1.41
SCN4BQ8IWT1 AC092171.4-201ENST00000609130 632 ntBASIC23.88■■□□□ 1.41
SCN4BQ8IWT1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SCN4BQ8IWT1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCN4BQ8IWT1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 LINC00543-201ENST00000567234 1845 ntBASIC23.87■■□□□ 1.41
SCN4BQ8IWT1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCN4BQ8IWT1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCN4BQ8IWT1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.86■■□□□ 1.41
SCN4BQ8IWT1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms