Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.13■■□□□ 1.61
SFR1Q86XK3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.12■■□□□ 1.61
SFR1Q86XK3 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.12■■□□□ 1.61
SFR1Q86XK3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.12■■□□□ 1.61
SFR1Q86XK3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SFR1Q86XK3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SFR1Q86XK3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SFR1Q86XK3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SFR1Q86XK3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SFR1Q86XK3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.11■■□□□ 1.61
SFR1Q86XK3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.11■■□□□ 1.61
SFR1Q86XK3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SFR1Q86XK3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SFR1Q86XK3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SFR1Q86XK3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SFR1Q86XK3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.1■■□□□ 1.61
SFR1Q86XK3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.1■■□□□ 1.61
SFR1Q86XK3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.1■■□□□ 1.61
SFR1Q86XK3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.1■■□□□ 1.61
SFR1Q86XK3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SFR1Q86XK3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SFR1Q86XK3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
SFR1Q86XK3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SFR1Q86XK3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SFR1Q86XK3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.09■■□□□ 1.61
SFR1Q86XK3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SFR1Q86XK3 AC005703.6-201ENST00000623265 1329 ntBASIC25.09■■□□□ 1.61
SFR1Q86XK3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SFR1Q86XK3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SFR1Q86XK3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SFR1Q86XK3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SFR1Q86XK3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SFR1Q86XK3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
SFR1Q86XK3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SFR1Q86XK3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SFR1Q86XK3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.6
SFR1Q86XK3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SFR1Q86XK3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
SFR1Q86XK3 KRT16P3-201ENST00000439127 1283 ntBASIC25.07■■□□□ 1.6
SFR1Q86XK3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.07■■□□□ 1.6
SFR1Q86XK3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SFR1Q86XK3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SFR1Q86XK3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
SFR1Q86XK3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.06■■□□□ 1.6
SFR1Q86XK3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SFR1Q86XK3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.06■■□□□ 1.6
SFR1Q86XK3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
SFR1Q86XK3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SFR1Q86XK3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
SFR1Q86XK3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SFR1Q86XK3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SFR1Q86XK3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SFR1Q86XK3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.05■■□□□ 1.6
SFR1Q86XK3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.05■■□□□ 1.6
SFR1Q86XK3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SFR1Q86XK3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
SFR1Q86XK3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SFR1Q86XK3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SFR1Q86XK3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
SFR1Q86XK3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SFR1Q86XK3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SFR1Q86XK3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SFR1Q86XK3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SFR1Q86XK3 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.04■■□□□ 1.6
SFR1Q86XK3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SFR1Q86XK3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SFR1Q86XK3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SFR1Q86XK3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SFR1Q86XK3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.04■■□□□ 1.6
SFR1Q86XK3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SFR1Q86XK3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.04■■□□□ 1.6
SFR1Q86XK3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SFR1Q86XK3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SFR1Q86XK3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SFR1Q86XK3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
SFR1Q86XK3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SFR1Q86XK3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SFR1Q86XK3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SFR1Q86XK3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.03■■□□□ 1.6
SFR1Q86XK3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SFR1Q86XK3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SFR1Q86XK3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.02■■□□□ 1.6
SFR1Q86XK3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SFR1Q86XK3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SFR1Q86XK3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SFR1Q86XK3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
SFR1Q86XK3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.02■■□□□ 1.6
SFR1Q86XK3 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.02■■□□□ 1.6
SFR1Q86XK3 MIR6724-1-201ENST00000616420 92 ntBASIC25.02■■□□□ 1.6
SFR1Q86XK3 MIR6724-2-201ENST00000616483 92 ntBASIC25.02■■□□□ 1.6
SFR1Q86XK3 MIR6724-4-201ENST00000617390 92 ntBASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms