Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 AC136469.2-201ENST00000623944 1028 ntBASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C9orf139Q6ZV77 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 AC020928.2-201ENST00000588717 2197 ntBASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C9orf139Q6ZV77 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
C9orf139Q6ZV77 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C9orf139Q6ZV77 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.33■□□□□ 0.53
C9orf139Q6ZV77 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
C9orf139Q6ZV77 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 CA15P2-201ENST00000611168 834 ntBASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C9orf139Q6ZV77 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf139Q6ZV77 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
C9orf139Q6ZV77 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf139Q6ZV77 ALDH1A3-203ENST00000557963 1670 ntBASIC18.32■□□□□ 0.52
C9orf139Q6ZV77 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C9orf139Q6ZV77 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.32■□□□□ 0.52
C9orf139Q6ZV77 AC026271.2-201ENST00000428091 497 ntBASIC18.32■□□□□ 0.52
C9orf139Q6ZV77 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.32■□□□□ 0.52
C9orf139Q6ZV77 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 AC009086.3-201ENST00000623486 1008 ntBASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 AP003733.4-201ENST00000623785 1697 ntBASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf139Q6ZV77 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf139Q6ZV77 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf139Q6ZV77 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 AC006455.2-201ENST00000429931 906 ntBASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 MIR3181-201ENST00000578512 73 ntBASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.28■□□□□ 0.52
C9orf139Q6ZV77 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms