Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC39BQ5VTQ0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39BQ5VTQ0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39BQ5VTQ0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.58■■□□□ 1.37
TTC39BQ5VTQ0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TTC39BQ5VTQ0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.58■■□□□ 1.37
TTC39BQ5VTQ0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TTC39BQ5VTQ0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39BQ5VTQ0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39BQ5VTQ0 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC39BQ5VTQ0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.57■■□□□ 1.36
TTC39BQ5VTQ0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.57■■□□□ 1.36
TTC39BQ5VTQ0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.57■■□□□ 1.36
TTC39BQ5VTQ0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TTC39BQ5VTQ0 AC133561.1-201ENST00000568600 2415 ntBASIC23.57■■□□□ 1.36
TTC39BQ5VTQ0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 AC004812.2-201ENST00000611079 2094 ntBASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
TTC39BQ5VTQ0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39BQ5VTQ0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC39BQ5VTQ0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39BQ5VTQ0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.55■■□□□ 1.36
TTC39BQ5VTQ0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39BQ5VTQ0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39BQ5VTQ0 AC012676.1-201ENST00000574705 1949 ntBASIC23.55■■□□□ 1.36
TTC39BQ5VTQ0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC39BQ5VTQ0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC39BQ5VTQ0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.53■■□□□ 1.36
TTC39BQ5VTQ0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.53■■□□□ 1.36
TTC39BQ5VTQ0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39BQ5VTQ0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
TTC39BQ5VTQ0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39BQ5VTQ0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.5■■□□□ 1.35
TTC39BQ5VTQ0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.49■■□□□ 1.35
TTC39BQ5VTQ0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms