Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PTPN20Q4JDL3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PTPN20Q4JDL3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTPN20Q4JDL3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.96■■□□□ 1.43
PTPN20Q4JDL3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTPN20Q4JDL3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.96■■□□□ 1.43
PTPN20Q4JDL3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTPN20Q4JDL3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
PTPN20Q4JDL3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
PTPN20Q4JDL3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PTPN20Q4JDL3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.96■■□□□ 1.43
PTPN20Q4JDL3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.95■■□□□ 1.43
PTPN20Q4JDL3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.95■■□□□ 1.43
PTPN20Q4JDL3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 UNC93B8-201ENST00000511903 705 ntBASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTPN20Q4JDL3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PTPN20Q4JDL3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
PTPN20Q4JDL3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.94■■□□□ 1.42
PTPN20Q4JDL3 MTDHP2-201ENST00000601468 714 ntBASIC23.94■■□□□ 1.42
PTPN20Q4JDL3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTPN20Q4JDL3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PTPN20Q4JDL3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTPN20Q4JDL3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTPN20Q4JDL3 GUSBP5-201ENST00000418136 578 ntBASIC23.93■■□□□ 1.42
PTPN20Q4JDL3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.93■■□□□ 1.42
PTPN20Q4JDL3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTPN20Q4JDL3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.92■■□□□ 1.42
PTPN20Q4JDL3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 AC010997.5-201ENST00000609182 354 ntBASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PTPN20Q4JDL3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 ANOS2P-203ENST00000472227 1816 ntBASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTPN20Q4JDL3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTPN20Q4JDL3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
PTPN20Q4JDL3 AC005703.6-201ENST00000623265 1329 ntBASIC23.89■■□□□ 1.42
PTPN20Q4JDL3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTPN20Q4JDL3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.89■■□□□ 1.41
PTPN20Q4JDL3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.89■■□□□ 1.41
PTPN20Q4JDL3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTPN20Q4JDL3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTPN20Q4JDL3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.88■■□□□ 1.41
PTPN20Q4JDL3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTPN20Q4JDL3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTPN20Q4JDL3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.88■■□□□ 1.41
PTPN20Q4JDL3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PTPN20Q4JDL3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PTPN20Q4JDL3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTPN20Q4JDL3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTPN20Q4JDL3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.86■■□□□ 1.41
PTPN20Q4JDL3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PTPN20Q4JDL3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTPN20Q4JDL3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.86■■□□□ 1.41
PTPN20Q4JDL3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTPN20Q4JDL3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.86■■□□□ 1.41
PTPN20Q4JDL3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN20Q4JDL3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms