Protein–RNA interactions for Protein: Q3LI81

KRTAP27-1, Keratin-associated protein 27-1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP27-1Q3LI81 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 DUSP8P3-201ENST00000399571 1760 ntBASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.66■□□□□ 0.74
KRTAP27-1Q3LI81 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.65■□□□□ 0.74
KRTAP27-1Q3LI81 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
KRTAP27-1Q3LI81 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRTAP27-1Q3LI81 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.64■□□□□ 0.74
KRTAP27-1Q3LI81 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRTAP27-1Q3LI81 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.64■□□□□ 0.73
KRTAP27-1Q3LI81 KRT125P-201ENST00000546827 989 ntBASIC19.64■□□□□ 0.73
KRTAP27-1Q3LI81 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRTAP27-1Q3LI81 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRTAP27-1Q3LI81 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.64■□□□□ 0.73
KRTAP27-1Q3LI81 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRTAP27-1Q3LI81 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
KRTAP27-1Q3LI81 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.63■□□□□ 0.73
KRTAP27-1Q3LI81 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRTAP27-1Q3LI81 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRTAP27-1Q3LI81 MIR4787-201ENST00000607364 84 ntBASIC19.63■□□□□ 0.73
KRTAP27-1Q3LI81 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KRTAP27-1Q3LI81 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRTAP27-1Q3LI81 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 AC239859.2-201ENST00000444165 318 ntBASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRTAP27-1Q3LI81 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.61■□□□□ 0.73
KRTAP27-1Q3LI81 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 AC005703.6-201ENST00000623265 1329 ntBASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRTAP27-1Q3LI81 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms