Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CFHR3Q02985 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CFHR3Q02985 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CFHR3Q02985 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CFHR3Q02985 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CFHR3Q02985 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CFHR3Q02985 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.76■□□□□ 0.43
CFHR3Q02985 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.76■□□□□ 0.43
CFHR3Q02985 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.76■□□□□ 0.43
CFHR3Q02985 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CFHR3Q02985 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.76■□□□□ 0.43
CFHR3Q02985 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.76■□□□□ 0.43
CFHR3Q02985 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.75■□□□□ 0.43
CFHR3Q02985 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.75■□□□□ 0.43
CFHR3Q02985 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.75■□□□□ 0.43
CFHR3Q02985 AC009102.2-201ENST00000606772 1639 ntBASIC17.75■□□□□ 0.43
CFHR3Q02985 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CFHR3Q02985 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFHR3Q02985 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFHR3Q02985 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFHR3Q02985 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CFHR3Q02985 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CFHR3Q02985 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFHR3Q02985 AL136116.3-201ENST00000402907 1138 ntBASIC17.74■□□□□ 0.43
CFHR3Q02985 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFHR3Q02985 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.74■□□□□ 0.43
CFHR3Q02985 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CFHR3Q02985 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CFHR3Q02985 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFHR3Q02985 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFHR3Q02985 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFHR3Q02985 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFHR3Q02985 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CFHR3Q02985 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFHR3Q02985 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFHR3Q02985 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFHR3Q02985 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
CFHR3Q02985 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.73■□□□□ 0.43
CFHR3Q02985 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.73■□□□□ 0.43
CFHR3Q02985 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFHR3Q02985 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFHR3Q02985 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFHR3Q02985 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.72■□□□□ 0.43
CFHR3Q02985 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CFHR3Q02985 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.72■□□□□ 0.43
CFHR3Q02985 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CFHR3Q02985 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFHR3Q02985 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CFHR3Q02985 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.72■□□□□ 0.43
CFHR3Q02985 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.72■□□□□ 0.43
CFHR3Q02985 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFHR3Q02985 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFHR3Q02985 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFHR3Q02985 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFHR3Q02985 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.71■□□□□ 0.43
CFHR3Q02985 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.71■□□□□ 0.43
CFHR3Q02985 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CFHR3Q02985 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.71■□□□□ 0.43
CFHR3Q02985 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CFHR3Q02985 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CFHR3Q02985 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CFHR3Q02985 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFHR3Q02985 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFHR3Q02985 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.7■□□□□ 0.42
CFHR3Q02985 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CFHR3Q02985 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CFHR3Q02985 C17orf82-201ENST00000623772 1530 ntBASIC17.7■□□□□ 0.42
CFHR3Q02985 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFHR3Q02985 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CFHR3Q02985 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFHR3Q02985 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFHR3Q02985 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFHR3Q02985 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFHR3Q02985 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CFHR3Q02985 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFHR3Q02985 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CFHR3Q02985 SRD5A1P1-201ENST00000442297 786 ntBASIC17.69■□□□□ 0.42
CFHR3Q02985 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFHR3Q02985 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.69■□□□□ 0.42
CFHR3Q02985 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFHR3Q02985 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFHR3Q02985 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFHR3Q02985 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFHR3Q02985 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFHR3Q02985 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFHR3Q02985 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFHR3Q02985 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFHR3Q02985 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFHR3Q02985 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFHR3Q02985 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms