Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.42■□□□□ 0.7
ACTBP60709 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTBP60709 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTBP60709 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.42■□□□□ 0.7
ACTBP60709 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTBP60709 RP9P-202ENST00000450133 1212 ntBASIC19.42■□□□□ 0.7
ACTBP60709 AC007029.1-201ENST00000604183 313 ntBASIC19.42■□□□□ 0.7
ACTBP60709 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
ACTBP60709 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTBP60709 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTBP60709 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
ACTBP60709 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTBP60709 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTBP60709 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
ACTBP60709 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTBP60709 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.4■□□□□ 0.7
ACTBP60709 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.4■□□□□ 0.7
ACTBP60709 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 HSD17B1P1-201ENST00000590052 955 ntBASIC19.4■□□□□ 0.7
ACTBP60709 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 AL161729.1-201ENST00000604104 1402 ntBASIC19.4■□□□□ 0.7
ACTBP60709 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.4■□□□□ 0.7
ACTBP60709 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTBP60709 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
ACTBP60709 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ACTBP60709 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.39■□□□□ 0.7
ACTBP60709 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.39■□□□□ 0.69
ACTBP60709 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTBP60709 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ACTBP60709 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTBP60709 AC093536.1-201ENST00000569153 554 ntBASIC19.39■□□□□ 0.69
ACTBP60709 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.39■□□□□ 0.69
ACTBP60709 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTBP60709 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
ACTBP60709 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.39■□□□□ 0.69
ACTBP60709 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ACTBP60709 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ACTBP60709 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.39■□□□□ 0.69
ACTBP60709 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTBP60709 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.39■□□□□ 0.69
ACTBP60709 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTBP60709 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.39■□□□□ 0.69
ACTBP60709 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ACTBP60709 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACTBP60709 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTBP60709 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTBP60709 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTBP60709 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTBP60709 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
ACTBP60709 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACTBP60709 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.38■□□□□ 0.69
ACTBP60709 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACTBP60709 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTBP60709 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTBP60709 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTBP60709 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.37■□□□□ 0.69
ACTBP60709 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ACTBP60709 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.37■□□□□ 0.69
ACTBP60709 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ACTBP60709 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.37■□□□□ 0.69
ACTBP60709 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTBP60709 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACTBP60709 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.36■□□□□ 0.69
ACTBP60709 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ACTBP60709 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ACTBP60709 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTBP60709 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ACTBP60709 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACTBP60709 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTBP60709 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTBP60709 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.35■□□□□ 0.69
ACTBP60709 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTBP60709 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACTBP60709 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTBP60709 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTBP60709 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACTBP60709 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ACTBP60709 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.35■□□□□ 0.69
ACTBP60709 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms