Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH15P55291 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH15P55291 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDH15P55291 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH15P55291 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDH15P55291 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH15P55291 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDH15P55291 AL359258.2-201ENST00000564063 1566 ntBASIC21.04■□□□□ 0.96
CDH15P55291 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDH15P55291 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
CDH15P55291 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH15P55291 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH15P55291 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH15P55291 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDH15P55291 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH15P55291 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH15P55291 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH15P55291 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CDH15P55291 AC126177.7-201ENST00000547904 679 ntBASIC21.03■□□□□ 0.96
CDH15P55291 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH15P55291 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH15P55291 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH15P55291 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH15P55291 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH15P55291 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH15P55291 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH15P55291 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH15P55291 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH15P55291 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH15P55291 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDH15P55291 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDH15P55291 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH15P55291 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH15P55291 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH15P55291 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CDH15P55291 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH15P55291 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH15P55291 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.01■□□□□ 0.95
CDH15P55291 AC012354.3-201ENST00000623734 483 ntBASIC21.01■□□□□ 0.95
CDH15P55291 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH15P55291 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDH15P55291 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH15P55291 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH15P55291 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH15P55291 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH15P55291 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH15P55291 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH15P55291 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CDH15P55291 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CDH15P55291 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21■□□□□ 0.95
CDH15P55291 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDH15P55291 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21■□□□□ 0.95
CDH15P55291 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH15P55291 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDH15P55291 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CDH15P55291 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH15P55291 AC092068.2-201ENST00000590491 1708 ntBASIC20.99■□□□□ 0.95
CDH15P55291 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDH15P55291 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH15P55291 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH15P55291 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH15P55291 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH15P55291 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH15P55291 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH15P55291 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH15P55291 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH15P55291 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH15P55291 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CDH15P55291 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH15P55291 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH15P55291 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CDH15P55291 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CDH15P55291 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.97■□□□□ 0.95
CDH15P55291 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH15P55291 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH15P55291 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH15P55291 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH15P55291 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH15P55291 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH15P55291 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH15P55291 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH15P55291 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.96■□□□□ 0.95
CDH15P55291 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH15P55291 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH15P55291 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH15P55291 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH15P55291 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH15P55291 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDH15P55291 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDH15P55291 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH15P55291 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms