Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGA2P52926 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HMGA2P52926 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGA2P52926 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGA2P52926 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGA2P52926 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HMGA2P52926 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGA2P52926 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGA2P52926 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGA2P52926 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA2P52926 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA2P52926 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA2P52926 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGA2P52926 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.8■□□□□ 0.92
HMGA2P52926 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA2P52926 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA2P52926 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA2P52926 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HMGA2P52926 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HMGA2P52926 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HMGA2P52926 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA2P52926 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
HMGA2P52926 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA2P52926 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
HMGA2P52926 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.79■□□□□ 0.92
HMGA2P52926 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA2P52926 AC011551.1-201ENST00000614101 683 ntBASIC20.79■□□□□ 0.92
HMGA2P52926 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA2P52926 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
HMGA2P52926 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA2P52926 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGA2P52926 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGA2P52926 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGA2P52926 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGA2P52926 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGA2P52926 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.78■□□□□ 0.92
HMGA2P52926 DUX4L9-201ENST00000449051 1259 ntBASIC20.78■□□□□ 0.92
HMGA2P52926 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGA2P52926 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGA2P52926 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGA2P52926 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGA2P52926 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGA2P52926 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGA2P52926 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGA2P52926 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.77■□□□□ 0.92
HMGA2P52926 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.77■□□□□ 0.92
HMGA2P52926 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGA2P52926 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HMGA2P52926 ESRRAP2-201ENST00000418437 1549 ntBASIC20.77■□□□□ 0.92
HMGA2P52926 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGA2P52926 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMGA2P52926 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMGA2P52926 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGA2P52926 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGA2P52926 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGA2P52926 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.76■□□□□ 0.91
HMGA2P52926 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.76■□□□□ 0.91
HMGA2P52926 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGA2P52926 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGA2P52926 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGA2P52926 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGA2P52926 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGA2P52926 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGA2P52926 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.75■□□□□ 0.91
HMGA2P52926 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGA2P52926 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HMGA2P52926 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGA2P52926 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGA2P52926 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGA2P52926 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.74■□□□□ 0.91
HMGA2P52926 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMGA2P52926 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.74■□□□□ 0.91
HMGA2P52926 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGA2P52926 AC137767.1-201ENST00000602918 1920 ntBASIC20.74■□□□□ 0.91
HMGA2P52926 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.74■□□□□ 0.91
HMGA2P52926 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.73■□□□□ 0.91
HMGA2P52926 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HMGA2P52926 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HMGA2P52926 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGA2P52926 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA2P52926 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGA2P52926 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA2P52926 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGA2P52926 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA2P52926 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
HMGA2P52926 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA2P52926 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA2P52926 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA2P52926 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
HMGA2P52926 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HMGA2P52926 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA2P52926 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HMGA2P52926 AC242852.2-201ENST00000615738 1807 ntBASIC20.71■□□□□ 0.91
HMGA2P52926 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.7■□□□□ 0.9
HMGA2P52926 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HMGA2P52926 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.7■□□□□ 0.9
HMGA2P52926 AC019171.1-201ENST00000601251 1056 ntBASIC20.7■□□□□ 0.9
HMGA2P52926 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA2P52926 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA2P52926 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms