Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 BX842568.3-201ENST00000418104 571 ntBASIC24.05■■□□□ 1.44
CLCN4P51793 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.05■■□□□ 1.44
CLCN4P51793 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.05■■□□□ 1.44
CLCN4P51793 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.05■■□□□ 1.44
CLCN4P51793 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.05■■□□□ 1.44
CLCN4P51793 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLCN4P51793 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CLCN4P51793 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CLCN4P51793 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.04■■□□□ 1.44
CLCN4P51793 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLCN4P51793 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.04■■□□□ 1.44
CLCN4P51793 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.04■■□□□ 1.44
CLCN4P51793 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLCN4P51793 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLCN4P51793 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.03■■□□□ 1.44
CLCN4P51793 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CLCN4P51793 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.03■■□□□ 1.44
CLCN4P51793 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN4P51793 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
CLCN4P51793 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN4P51793 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCN4P51793 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.02■■□□□ 1.44
CLCN4P51793 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN4P51793 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CLCN4P51793 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN4P51793 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
CLCN4P51793 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN4P51793 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.01■■□□□ 1.43
CLCN4P51793 AL161729.1-201ENST00000604104 1402 ntBASIC24.01■■□□□ 1.43
CLCN4P51793 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN4P51793 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CLCN4P51793 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CLCN4P51793 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CLCN4P51793 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLCN4P51793 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
CLCN4P51793 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLCN4P51793 GRAMD4P2-201ENST00000423297 1097 ntBASIC24■■□□□ 1.43
CLCN4P51793 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLCN4P51793 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24■■□□□ 1.43
CLCN4P51793 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24■■□□□ 1.43
CLCN4P51793 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN4P51793 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.99■■□□□ 1.43
CLCN4P51793 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN4P51793 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CLCN4P51793 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN4P51793 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN4P51793 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.99■■□□□ 1.43
CLCN4P51793 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN4P51793 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN4P51793 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CLCN4P51793 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.98■■□□□ 1.43
CLCN4P51793 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN4P51793 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.98■■□□□ 1.43
CLCN4P51793 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.98■■□□□ 1.43
CLCN4P51793 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.98■■□□□ 1.43
CLCN4P51793 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.98■■□□□ 1.43
CLCN4P51793 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN4P51793 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN4P51793 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN4P51793 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN4P51793 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.98■■□□□ 1.43
CLCN4P51793 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN4P51793 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.97■■□□□ 1.43
CLCN4P51793 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN4P51793 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN4P51793 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.97■■□□□ 1.43
CLCN4P51793 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN4P51793 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CLCN4P51793 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN4P51793 HLA-L-211ENST00000482052 1765 ntBASIC23.96■■□□□ 1.43
CLCN4P51793 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN4P51793 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.96■■□□□ 1.43
CLCN4P51793 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.96■■□□□ 1.43
CLCN4P51793 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN4P51793 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN4P51793 pRNA.6-201ENST00000610482 90 ntBASIC23.96■■□□□ 1.43
CLCN4P51793 pRNA.5-201ENST00000612139 90 ntBASIC23.96■■□□□ 1.43
CLCN4P51793 pRNA.11-201ENST00000618423 90 ntBASIC23.96■■□□□ 1.43
CLCN4P51793 pRNA.13-201ENST00000619112 90 ntBASIC23.96■■□□□ 1.43
CLCN4P51793 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN4P51793 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.96■■□□□ 1.43
CLCN4P51793 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN4P51793 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CLCN4P51793 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
CLCN4P51793 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CLCN4P51793 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLCN4P51793 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.95■■□□□ 1.42
CLCN4P51793 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLCN4P51793 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CLCN4P51793 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.94■■□□□ 1.42
CLCN4P51793 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
CLCN4P51793 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLCN4P51793 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CLCN4P51793 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.94■■□□□ 1.42
CLCN4P51793 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.94■■□□□ 1.42
CLCN4P51793 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.94■■□□□ 1.42
CLCN4P51793 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLCN4P51793 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.93■■□□□ 1.42
CLCN4P51793 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CLCN4P51793 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms