Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 UBE3D-207ENST00000509102 1246 ntTSL 1 (best)20.44■□□□□ 0.862e-7■■■■■ 26.8
MATR3P43243 FUCA2-202ENST00000367585 646 ntTSL 420.27■□□□□ 0.842e-7■■■■■ 26.8
MATR3P43243 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.05■□□□□ 0.82e-7■■■■■ 26.8
MATR3P43243 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.8■□□□□ 0.762e-7■■■■■ 26.8
MATR3P43243 ZDHHC14-202ENST00000341375 1934 ntTSL 1 (best)19.1■□□□□ 0.652e-7■■■■■ 26.8
MATR3P43243 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.582e-7■■■■■ 26.8
MATR3P43243 C16orf87-203ENST00000564250 473 ntTSL 318.54■□□□□ 0.562e-7■■■■■ 26.8
MATR3P43243 UBE3D-204ENST00000430071 1352 ntTSL 518.45■□□□□ 0.542e-7■■■■■ 26.8
MATR3P43243 APLP2-225ENST00000534761 551 ntTSL 518.42■□□□□ 0.542e-7■■■■■ 26.8
MATR3P43243 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.21■□□□□ 0.511e-9■■■■■ 26.8
MATR3P43243 GATAD2B-202ENST00000634401 867 ntTSL 518.2■□□□□ 0.52e-7■■■■■ 26.8
MATR3P43243 UBE3D-201ENST00000237186 1879 ntTSL 1 (best)17.59■□□□□ 0.412e-7■■■■■ 26.8
MATR3P43243 RNF13-207ENST00000467977 761 ntTSL 517.43■□□□□ 0.382e-7■■■■■ 26.8
MATR3P43243 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.222e-7■■■■■ 26.8
MATR3P43243 RNF13-205ENST00000466478 593 ntTSL 516.3■□□□□ 0.22e-7■■■■■ 26.8
MATR3P43243 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.182e-7■■■■■ 26.8
MATR3P43243 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.162e-7■■■■■ 26.8
MATR3P43243 APLP2-211ENST00000529235 537 ntTSL 416.06■□□□□ 0.162e-7■■■■■ 26.8
MATR3P43243 ZDHHC14-205ENST00000422910 2883 ntTSL 215.28■□□□□ 0.042e-7■■■■■ 26.8
MATR3P43243 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.032e-7■■■■■ 26.8
MATR3P43243 TMEM9B-AS1-203ENST00000534349 383 ntTSL 515.15■□□□□ 0.022e-7■■■■■ 26.8
MATR3P43243 GATAD2B-210ENST00000637331 145 ntTSL 515.06■□□□□ 02e-7■■■■■ 26.8
MATR3P43243 ZDHHC14-209ENST00000523706 5146 ntTSL 214.95□□□□□ -0.022e-7■■■■■ 26.8
MATR3P43243 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.042e-7■■■■■ 26.8
MATR3P43243 ST7-226ENST00000487459 1681 ntTSL 514.31□□□□□ -0.123e-8■■■■■ 26.8
MATR3P43243 RNF13-215ENST00000491086 1104 ntTSL 214.04□□□□□ -0.162e-7■■■■■ 26.8
MATR3P43243 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.182e-7■■■■■ 26.8
MATR3P43243 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.192e-7■■■■■ 26.8
MATR3P43243 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.262e-7■■■■■ 26.8
MATR3P43243 RNF13-208ENST00000467996 767 ntTSL 512.94□□□□□ -0.342e-7■■■■■ 26.8
MATR3P43243 ZNF609-204ENST00000559364 1321 ntTSL 1 (best)12.79□□□□□ -0.362e-7■■■■■ 26.8
MATR3P43243 TMEM9B-AS1-202ENST00000532599 615 ntTSL 312.27□□□□□ -0.452e-7■■■■■ 26.8
MATR3P43243 ZDHHC14-207ENST00000518214 861 ntTSL 311.91□□□□□ -0.52e-7■■■■■ 26.8
MATR3P43243 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.512e-7■■■■■ 26.8
MATR3P43243 ZDHHC14-206ENST00000517432 3646 ntTSL 211.81□□□□□ -0.522e-7■■■■■ 26.8
MATR3P43243 PIN4-204ENST00000423432 1605 ntTSL 2 BASIC11.26□□□□□ -0.612e-7■■■■■ 26.8
MATR3P43243 RNF13-211ENST00000470151 701 ntTSL 39.95□□□□□ -0.822e-7■■■■■ 26.8
MATR3P43243 GLS-214ENST00000495444 394 ntTSL 39.88□□□□□ -0.832e-6■■■■■ 26.8
MATR3P43243 NAPEPLD-204ENST00000418294 565 ntTSL 49.87□□□□□ -0.832e-7■■■■■ 26.8
MATR3P43243 RNF13-212ENST00000474348 1027 ntTSL 59.81□□□□□ -0.842e-7■■■■■ 26.8
MATR3P43243 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.852e-7■■■■■ 26.8
MATR3P43243 GATAD2B-207ENST00000634791 642 ntTSL 39.34□□□□□ -0.912e-7■■■■■ 26.8
MATR3P43243 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC9.01□□□□□ -0.972e-7■■■■■ 26.8
MATR3P43243 ST7-213ENST00000432298 1956 ntTSL 2 BASIC8.54□□□□□ -1.043e-8■■■■■ 26.8
MATR3P43243 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.062e-7■■■■■ 26.8
MATR3P43243 PIN4-207ENST00000496835 678 ntTSL 28.37□□□□□ -1.072e-7■■■■■ 26.8
MATR3P43243 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.092e-7■■■■■ 26.8
MATR3P43243 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.132e-7■■■■■ 26.8
MATR3P43243 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.9□□□□□ -1.143e-8■■■■■ 26.8
MATR3P43243 PIN4-205ENST00000439980 577 ntTSL 47.61□□□□□ -1.192e-7■■■■■ 26.8
MATR3P43243 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.24□□□□□ -1.253e-8■■■■■ 26.8
MATR3P43243 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.11□□□□□ -1.272e-7■■■■■ 26.8
MATR3P43243 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.282e-7■■■■■ 26.8
MATR3P43243 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.96□□□□□ -1.33e-8■■■■■ 26.8
MATR3P43243 USP9Y-203ENST00000453031 909 ntTSL 36.56□□□□□ -1.362e-7■■■■■ 26.8
MATR3P43243 APLP2-212ENST00000529483 323 ntTSL 56.48□□□□□ -1.372e-7■■■■■ 26.8
MATR3P43243 MAGI1-215ENST00000496734 589 ntTSL 26.37□□□□□ -1.392e-7■■■■■ 26.8
MATR3P43243 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.25□□□□□ -1.412e-7■■■■■ 26.8
MATR3P43243 GLS-207ENST00000417154 837 ntTSL 36.17□□□□□ -1.422e-6■■■■■ 26.8
MATR3P43243 RNF13-210ENST00000468648 570 ntTSL 56.08□□□□□ -1.442e-7■■■■■ 26.8
MATR3P43243 DROSHA-210ENST00000510178 379 ntTSL 55.99□□□□□ -1.452e-7■■■■■ 26.8
MATR3P43243 RNF13-204ENST00000459632 1008 ntTSL 45.72□□□□□ -1.492e-7■■■■■ 26.8
MATR3P43243 DROSHA-203ENST00000504133 617 ntTSL 35.56□□□□□ -1.522e-7■■■■■ 26.8
MATR3P43243 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.41□□□□□ -1.542e-7■■■■■ 26.8
MATR3P43243 GLS-210ENST00000468352 413 ntTSL 35.3□□□□□ -1.562e-6■■■■■ 26.8
MATR3P43243 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.92□□□□□ -1.623e-8■■■■■ 26.8
MATR3P43243 NAPEPLD-206ENST00000422589 2672 ntTSL 1 (best)4.78□□□□□ -1.642e-7■■■■■ 26.8
MATR3P43243 GLS-209ENST00000461965 575 ntTSL 44.17□□□□□ -1.742e-6■■■■■ 26.8
MATR3P43243 RNF13-206ENST00000466795 586 ntTSL 43.42□□□□□ -1.862e-7■■■■■ 26.8
MATR3P43243 RNF13-214ENST00000490631 583 ntTSL 33.42□□□□□ -1.862e-7■■■■■ 26.8
MATR3P43243 CASP2-202ENST00000350623 1146 ntTSL 1 (best)15.54■□□□□ 0.085e-7■■■■■ 26.8
MATR3P43243 CASP2-206ENST00000493642 2166 ntTSL 1 (best)11.24□□□□□ -0.615e-7■■■■■ 26.8
MATR3P43243 SFXN5-213ENST00000479293 1808 ntTSL 226.95■■□□□ 1.915e-7■■■■■ 26.8
MATR3P43243 SFXN5-210ENST00000472259 1690 ntTSL 326.47■■□□□ 1.835e-7■■■■■ 26.8
MATR3P43243 SFXN5-222ENST00000497144 598 ntTSL 419.65■□□□□ 0.745e-7■■■■■ 26.8
MATR3P43243 SFXN5-203ENST00000411783 915 ntTSL 316.2■□□□□ 0.185e-7■■■■■ 26.8
MATR3P43243 SFXN5-204ENST00000416579 895 ntTSL 316.18■□□□□ 0.185e-7■■■■■ 26.8
MATR3P43243 SFXN5-212ENST00000475630 422 ntTSL 314.22□□□□□ -0.135e-7■■■■■ 26.8
MATR3P43243 SFXN5-206ENST00000450185 2975 ntTSL 213.34□□□□□ -0.275e-7■■■■■ 26.8
MATR3P43243 SFXN5-201ENST00000272433 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.395e-7■■■■■ 26.8
MATR3P43243 SFXN5-202ENST00000410065 840 ntTSL 1 (best) BASIC12.5□□□□□ -0.415e-7■■■■■ 26.8
MATR3P43243 SFXN5-205ENST00000442582 489 ntTSL 311.53□□□□□ -0.565e-7■■■■■ 26.8
MATR3P43243 SFXN5-217ENST00000485057 447 ntTSL 57.18□□□□□ -1.265e-7■■■■■ 26.8
MATR3P43243 SFXN5-216ENST00000484123 351 ntTSL 23.54□□□□□ -1.845e-7■■■■■ 26.8
MATR3P43243 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.86■□□□□ 0.934e-8■■■■■ 26.8
MATR3P43243 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.94e-8■■■■■ 26.8
MATR3P43243 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.76■□□□□ 0.754e-8■■■■■ 26.8
MATR3P43243 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.14e-8■■■■■ 26.8
MATR3P43243 NDUFA10-212ENST00000485344 4509 ntTSL 213.76□□□□□ -0.214e-8■■■■■ 26.8
MATR3P43243 NDUFA10-207ENST00000443626 776 ntTSL 513.54□□□□□ -0.244e-8■■■■■ 26.8
MATR3P43243 NDUFA10-206ENST00000419408 662 ntTSL 511.52□□□□□ -0.574e-8■■■■■ 26.8
MATR3P43243 NDUFA10-211ENST00000476216 817 ntTSL 210.29□□□□□ -0.764e-8■■■■■ 26.8
MATR3P43243 NDUFA10-208ENST00000444548 621 ntTSL 39.42□□□□□ -0.94e-8■■■■■ 26.8
MATR3P43243 NDUFA10-209ENST00000448880 434 ntTSL 52.44□□□□□ -2.024e-8■■■■■ 26.8
MATR3P43243 HDLBP-218ENST00000441124 708 ntTSL 220.11■□□□□ 0.819e-7■■■■■ 26.8
MATR3P43243 HDLBP-210ENST00000423693 544 ntTSL 514.15□□□□□ -0.149e-7■■■■■ 26.8
MATR3P43243 HDLBP-246ENST00000496569 374 ntTSL 413.37□□□□□ -0.279e-7■■■■■ 26.8
MATR3P43243 HDLBP-207ENST00000420451 559 ntTSL 411.55□□□□□ -0.569e-7■■■■■ 26.8
MATR3P43243 HDLBP-206ENST00000417540 525 ntTSL 411.18□□□□□ -0.629e-7■■■■■ 26.8
MATR3P43243 HDLBP-216ENST00000428482 1096 ntTSL 511.18□□□□□ -0.629e-7■■■■■ 26.8
Retrieved 100 of 16,209 protein–RNA pairs in 81.2 ms