RNA–Protein interactions for RNA: ENST00000453031.1

USP9Y-203, Transcript of ubiquitin specific peptidase 9 Y-linked, humanhuman

TSL 3

Gene USP9Y, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9Y-203ENST00000453031 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
USP9Y-203ENST00000453031 CHIC1Q5VXU3 224 aa26.71■■□□□ 1.87
USP9Y-203ENST00000453031 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
USP9Y-203ENST00000453031 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
USP9Y-203ENST00000453031 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
USP9Y-203ENST00000453031 FOXD1Q16676 465 aa21.4■■□□□ 1.02
USP9Y-203ENST00000453031 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
USP9Y-203ENST00000453031 ADRA2BP18089 450 aa20.68■□□□□ 0.9
USP9Y-203ENST00000453031 PIAS4Q8N2W9 510 aaPredicted RBP20.18■□□□□ 0.82
USP9Y-203ENST00000453031 MSH5O43196 834 aa19.65■□□□□ 0.74
USP9Y-203ENST00000453031 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
USP9Y-203ENST00000453031 KCNA4P22459 653 aa18.89■□□□□ 0.61
USP9Y-203ENST00000453031 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
USP9Y-203ENST00000453031 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
USP9Y-203ENST00000453031 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
USP9Y-203ENST00000453031 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
USP9Y-203ENST00000453031 NPM3O75607 178 aaKnown RBP18.45■□□□□ 0.54
USP9Y-203ENST00000453031 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
USP9Y-203ENST00000453031 RNF216Q9NWF9 866 aaPredicted RBP18.2■□□□□ 0.5
USP9Y-203ENST00000453031 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
USP9Y-203ENST00000453031 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
USP9Y-203ENST00000453031 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
USP9Y-203ENST00000453031 POTEDQ86YR6 584 aa17.69■□□□□ 0.42
USP9Y-203ENST00000453031 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
USP9Y-203ENST00000453031 DCAF8L1A6NGE4 600 aa17.57■□□□□ 0.4
USP9Y-203ENST00000453031 ZBTB22O15209 634 aa17.42■□□□□ 0.38
USP9Y-203ENST00000453031 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
USP9Y-203ENST00000453031 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
USP9Y-203ENST00000453031 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
USP9Y-203ENST00000453031 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
USP9Y-203ENST00000453031 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
USP9Y-203ENST00000453031 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
USP9Y-203ENST00000453031 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
USP9Y-203ENST00000453031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
USP9Y-203ENST00000453031 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
USP9Y-203ENST00000453031 SAMD1Q6SPF0 538 aaPredicted RBP16.74■□□□□ 0.27
USP9Y-203ENST00000453031 ATXN8OSP0DMR3 200 aa16.71■□□□□ 0.27
USP9Y-203ENST00000453031 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
USP9Y-203ENST00000453031 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
USP9Y-203ENST00000453031 APLP2Q06481 763 aa16.54■□□□□ 0.24
USP9Y-203ENST00000453031 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
USP9Y-203ENST00000453031 CAPN15O75808 1086 aa16.36■□□□□ 0.21
USP9Y-203ENST00000453031 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
USP9Y-203ENST00000453031 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
USP9Y-203ENST00000453031 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
USP9Y-203ENST00000453031 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
USP9Y-203ENST00000453031 DSG3P32926 999 aa16.11■□□□□ 0.17
USP9Y-203ENST00000453031 POLA2Q14181 598 aa16.09■□□□□ 0.17
USP9Y-203ENST00000453031 ABCB7O75027 752 aa16.08■□□□□ 0.16
USP9Y-203ENST00000453031 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
USP9Y-203ENST00000453031 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.12
USP9Y-203ENST00000453031 FBLN2P98095 1184 aa15.82■□□□□ 0.12
USP9Y-203ENST00000453031 FKBP8Q14318 412 aa15.68■□□□□ 0.1
USP9Y-203ENST00000453031 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
USP9Y-203ENST00000453031 SPDYE4A6NLX3 237 aa15.54■□□□□ 0.08
USP9Y-203ENST00000453031 SPDYE2BA6NHP3 402 aa15.44■□□□□ 0.06
USP9Y-203ENST00000453031 SPDYE6P0CI01 402 aa15.44■□□□□ 0.06
USP9Y-203ENST00000453031 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
USP9Y-203ENST00000453031 PROM2Q8N271 834 aa15.38■□□□□ 0.05
USP9Y-203ENST00000453031 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
USP9Y-203ENST00000453031 SSUH2Q9Y2M2 353 aa15.37■□□□□ 0.05
USP9Y-203ENST00000453031 ABCC9O60706 1549 aa15.31■□□□□ 0.04
USP9Y-203ENST00000453031 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
USP9Y-203ENST00000453031 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
USP9Y-203ENST00000453031 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
USP9Y-203ENST00000453031 FBXO3Q9UK99 471 aa15.06■□□□□ 0
USP9Y-203ENST00000453031 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
USP9Y-203ENST00000453031 STAG3Q9UJ98 1225 aa14.94□□□□□ -0.02
USP9Y-203ENST00000453031 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
USP9Y-203ENST00000453031 VASPP50552 380 aaPredicted RBP14.9□□□□□ -0.02
USP9Y-203ENST00000453031 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
USP9Y-203ENST00000453031 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
USP9Y-203ENST00000453031 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
USP9Y-203ENST00000453031 IFNLR1Q8IU57 520 aaPredicted RBP14.71□□□□□ -0.05
USP9Y-203ENST00000453031 MIER1Q8N108 512 aa14.68□□□□□ -0.06
USP9Y-203ENST00000453031 PLCD3Q8N3E9 789 aa14.68□□□□□ -0.06
USP9Y-203ENST00000453031 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
USP9Y-203ENST00000453031 CREBZFQ9NS37 354 aa14.63□□□□□ -0.07
USP9Y-203ENST00000453031 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
USP9Y-203ENST00000453031 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
USP9Y-203ENST00000453031 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
USP9Y-203ENST00000453031 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
USP9Y-203ENST00000453031 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
USP9Y-203ENST00000453031 AMER1Q5JTC6 1135 aaPredicted RBP14.51□□□□□ -0.09
USP9Y-203ENST00000453031 RTN4Q9NQC3 1192 aaKnown RBP14.51□□□□□ -0.09
USP9Y-203ENST00000453031 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
USP9Y-203ENST00000453031 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
USP9Y-203ENST00000453031 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
USP9Y-203ENST00000453031 SPOCK2Q92563 424 aa14.49□□□□□ -0.09
USP9Y-203ENST00000453031 PRKAR2AP13861 404 aaKnown RBP14.46□□□□□ -0.09
USP9Y-203ENST00000453031 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
USP9Y-203ENST00000453031 NUBP1P53384 320 aa14.37□□□□□ -0.11
USP9Y-203ENST00000453031 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
USP9Y-203ENST00000453031 PKD2Q13563 968 aa14.28□□□□□ -0.12
USP9Y-203ENST00000453031 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
USP9Y-203ENST00000453031 RB1CC1Q8TDY2 1594 aa14.22□□□□□ -0.13
USP9Y-203ENST00000453031 CIZ1Q9ULV3 898 aaPredicted RBP14.21□□□□□ -0.13
USP9Y-203ENST00000453031 FAM212AQ96EL1 285 aa14.2□□□□□ -0.14
USP9Y-203ENST00000453031 GSE1Q14687 1217 aa14.19□□□□□ -0.14
USP9Y-203ENST00000453031 DCAF8Q5TAQ9 597 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms