Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMP24386 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMP24386 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP24386 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHMP24386 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CHMP24386 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP24386 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP24386 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP24386 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CHMP24386 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.12■□□□□ 0.97
CHMP24386 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHMP24386 GUSBP5-201ENST00000418136 578 ntBASIC21.12■□□□□ 0.97
CHMP24386 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CHMP24386 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.12■□□□□ 0.97
CHMP24386 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP24386 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.12■□□□□ 0.97
CHMP24386 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CHMP24386 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP24386 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
CHMP24386 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.11■□□□□ 0.97
CHMP24386 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP24386 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP24386 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHMP24386 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CHMP24386 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP24386 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CHMP24386 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP24386 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP24386 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.1■□□□□ 0.97
CHMP24386 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP24386 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP24386 AC021242.3-201ENST00000607598 1377 ntBASIC21.1■□□□□ 0.97
CHMP24386 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP24386 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHMP24386 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHMP24386 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHMP24386 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP24386 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP24386 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP24386 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP24386 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHMP24386 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP24386 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP24386 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.08■□□□□ 0.97
CHMP24386 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHMP24386 MIR4787-201ENST00000607364 84 ntBASIC21.08■□□□□ 0.97
CHMP24386 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP24386 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP24386 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP24386 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP24386 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP24386 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP24386 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.07■□□□□ 0.96
CHMP24386 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP24386 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
CHMP24386 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.06■□□□□ 0.96
CHMP24386 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHMP24386 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP24386 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP24386 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.06■□□□□ 0.96
CHMP24386 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP24386 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP24386 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP24386 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP24386 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.05■□□□□ 0.96
CHMP24386 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CHMP24386 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP24386 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP24386 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CHMP24386 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP24386 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP24386 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
CHMP24386 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP24386 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP24386 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP24386 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP24386 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.04■□□□□ 0.96
CHMP24386 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP24386 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP24386 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP24386 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.04■□□□□ 0.96
CHMP24386 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.04■□□□□ 0.96
CHMP24386 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP24386 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHMP24386 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP24386 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHMP24386 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.04■□□□□ 0.96
CHMP24386 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CHMP24386 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP24386 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms