Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPH2P23942 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPH2P23942 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPH2P23942 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.68■■□□□ 1.06
PRPH2P23942 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPH2P23942 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPH2P23942 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPH2P23942 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PRPH2P23942 AC103834.1-201ENST00000520383 144 ntBASIC21.67■■□□□ 1.06
PRPH2P23942 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.67■■□□□ 1.06
PRPH2P23942 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.67■■□□□ 1.06
PRPH2P23942 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.67■■□□□ 1.06
PRPH2P23942 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPH2P23942 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRPH2P23942 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRPH2P23942 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.67■■□□□ 1.06
PRPH2P23942 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.66■■□□□ 1.06
PRPH2P23942 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPH2P23942 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPH2P23942 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPH2P23942 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.66■■□□□ 1.06
PRPH2P23942 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PRPH2P23942 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.65■■□□□ 1.06
PRPH2P23942 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.65■■□□□ 1.06
PRPH2P23942 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPH2P23942 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.65■■□□□ 1.06
PRPH2P23942 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PRPH2P23942 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPH2P23942 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.65■■□□□ 1.06
PRPH2P23942 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPH2P23942 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPH2P23942 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.64■■□□□ 1.06
PRPH2P23942 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
PRPH2P23942 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRPH2P23942 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRPH2P23942 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRPH2P23942 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.64■■□□□ 1.05
PRPH2P23942 AL033527.3-201ENST00000566366 1196 ntBASIC21.64■■□□□ 1.05
PRPH2P23942 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.64■■□□□ 1.05
PRPH2P23942 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRPH2P23942 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PRPH2P23942 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRPH2P23942 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRPH2P23942 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.64■■□□□ 1.05
PRPH2P23942 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PRPH2P23942 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.64■■□□□ 1.05
PRPH2P23942 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PRPH2P23942 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRPH2P23942 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRPH2P23942 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
PRPH2P23942 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.63■■□□□ 1.05
PRPH2P23942 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.63■■□□□ 1.05
PRPH2P23942 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
PRPH2P23942 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PRPH2P23942 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRPH2P23942 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPH2P23942 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPH2P23942 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.62■■□□□ 1.05
PRPH2P23942 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPH2P23942 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.62■■□□□ 1.05
PRPH2P23942 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPH2P23942 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPH2P23942 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPH2P23942 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRPH2P23942 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPH2P23942 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.61■■□□□ 1.05
PRPH2P23942 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.61■■□□□ 1.05
PRPH2P23942 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.61■■□□□ 1.05
PRPH2P23942 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPH2P23942 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.61■■□□□ 1.05
PRPH2P23942 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPH2P23942 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPH2P23942 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.61■■□□□ 1.05
PRPH2P23942 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.61■■□□□ 1.05
PRPH2P23942 AC103724.3-201ENST00000564481 992 ntBASIC21.61■■□□□ 1.05
PRPH2P23942 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPH2P23942 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
PRPH2P23942 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PRPH2P23942 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRPH2P23942 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.6■■□□□ 1.05
PRPH2P23942 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRPH2P23942 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.6■■□□□ 1.05
PRPH2P23942 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPH2P23942 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPH2P23942 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.6■■□□□ 1.05
PRPH2P23942 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.6■■□□□ 1.05
PRPH2P23942 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPH2P23942 SNX5-217ENST00000606557 1087 ntBASIC21.6■■□□□ 1.05
PRPH2P23942 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPH2P23942 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.6■■□□□ 1.05
PRPH2P23942 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPH2P23942 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPH2P23942 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPH2P23942 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRPH2P23942 AC079834.2-201ENST00000609776 1949 ntBASIC21.59■■□□□ 1.05
PRPH2P23942 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPH2P23942 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPH2P23942 AC137630.3-201ENST00000607245 391 ntBASIC21.59■■□□□ 1.05
PRPH2P23942 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PRPH2P23942 AC079630.1-202ENST00000618127 1840 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms