Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MRPL3P09001 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.29■□□□□ 0.84
MRPL3P09001 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL3P09001 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL3P09001 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.29■□□□□ 0.84
MRPL3P09001 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL3P09001 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL3P09001 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
MRPL3P09001 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL3P09001 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL3P09001 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MRPL3P09001 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.29■□□□□ 0.84
MRPL3P09001 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.29■□□□□ 0.84
MRPL3P09001 AL022069.1-201ENST00000568025 1636 ntBASIC20.28■□□□□ 0.84
MRPL3P09001 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL3P09001 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL3P09001 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MRPL3P09001 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.28■□□□□ 0.84
MRPL3P09001 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL3P09001 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL3P09001 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MRPL3P09001 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL3P09001 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL3P09001 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL3P09001 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MRPL3P09001 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.27■□□□□ 0.84
MRPL3P09001 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MRPL3P09001 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MRPL3P09001 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MRPL3P09001 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
MRPL3P09001 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.26■□□□□ 0.83
MRPL3P09001 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL3P09001 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL3P09001 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL3P09001 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.26■□□□□ 0.83
MRPL3P09001 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL3P09001 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MRPL3P09001 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL3P09001 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL3P09001 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL3P09001 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL3P09001 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL3P09001 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MRPL3P09001 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
MRPL3P09001 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.25■□□□□ 0.83
MRPL3P09001 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL3P09001 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL3P09001 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL3P09001 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.25■□□□□ 0.83
MRPL3P09001 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.25■□□□□ 0.83
MRPL3P09001 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.25■□□□□ 0.83
MRPL3P09001 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.25■□□□□ 0.83
MRPL3P09001 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.25■□□□□ 0.83
MRPL3P09001 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MRPL3P09001 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL3P09001 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL3P09001 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
MRPL3P09001 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL3P09001 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL3P09001 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MRPL3P09001 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL3P09001 LONRF2P2-201ENST00000439212 571 ntBASIC20.24■□□□□ 0.83
MRPL3P09001 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL3P09001 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL3P09001 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL3P09001 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.24■□□□□ 0.83
MRPL3P09001 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL3P09001 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL3P09001 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL3P09001 CLDN5-201ENST00000403084 2357 ntBASIC20.23■□□□□ 0.83
MRPL3P09001 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
MRPL3P09001 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL3P09001 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL3P09001 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
MRPL3P09001 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL3P09001 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL3P09001 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL3P09001 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.23■□□□□ 0.83
MRPL3P09001 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL3P09001 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL3P09001 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL3P09001 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL3P09001 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.22■□□□□ 0.83
MRPL3P09001 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL3P09001 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL3P09001 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL3P09001 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.22■□□□□ 0.83
MRPL3P09001 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.22■□□□□ 0.83
MRPL3P09001 U85056.1-201ENST00000616429 682 ntBASIC20.22■□□□□ 0.83
MRPL3P09001 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL3P09001 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL3P09001 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL3P09001 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL3P09001 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL3P09001 AC131274.2-201ENST00000580697 1507 ntBASIC20.22■□□□□ 0.83
MRPL3P09001 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.21■□□□□ 0.83
MRPL3P09001 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MRPL3P09001 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.21■□□□□ 0.83
MRPL3P09001 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL3P09001 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms