Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT6AP02538 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT6AP02538 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT6AP02538 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
KRT6AP02538 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT6AP02538 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT6AP02538 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT6AP02538 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT6AP02538 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT6AP02538 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT6AP02538 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT6AP02538 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT6AP02538 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.91■■□□□ 1.1
KRT6AP02538 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT6AP02538 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT6AP02538 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KRT6AP02538 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.9■■□□□ 1.1
KRT6AP02538 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT6AP02538 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.9■■□□□ 1.1
KRT6AP02538 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT6AP02538 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KRT6AP02538 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT6AP02538 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT6AP02538 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT6AP02538 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT6AP02538 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
KRT6AP02538 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.89■■□□□ 1.1
KRT6AP02538 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KRT6AP02538 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT6AP02538 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
KRT6AP02538 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT6AP02538 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KRT6AP02538 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KRT6AP02538 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT6AP02538 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT6AP02538 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
KRT6AP02538 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT6AP02538 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT6AP02538 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT6AP02538 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT6AP02538 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT6AP02538 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.88■■□□□ 1.09
KRT6AP02538 AC004448.1-201ENST00000458332 883 ntBASIC21.88■■□□□ 1.09
KRT6AP02538 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT6AP02538 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT6AP02538 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
KRT6AP02538 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT6AP02538 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.88■■□□□ 1.09
KRT6AP02538 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
KRT6AP02538 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT6AP02538 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT6AP02538 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT6AP02538 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT6AP02538 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
KRT6AP02538 YBX1P4-201ENST00000392794 808 ntBASIC21.87■■□□□ 1.09
KRT6AP02538 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
KRT6AP02538 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.87■■□□□ 1.09
KRT6AP02538 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT6AP02538 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT6AP02538 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT6AP02538 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT6AP02538 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
KRT6AP02538 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT6AP02538 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KRT6AP02538 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KRT6AP02538 DUSP8P3-201ENST00000399571 1760 ntBASIC21.86■■□□□ 1.09
KRT6AP02538 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT6AP02538 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT6AP02538 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.85■■□□□ 1.09
KRT6AP02538 AC103834.1-201ENST00000520383 144 ntBASIC21.85■■□□□ 1.09
KRT6AP02538 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT6AP02538 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT6AP02538 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT6AP02538 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT6AP02538 C9orf163-202ENST00000624034 2573 ntBASIC21.85■■□□□ 1.09
KRT6AP02538 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT6AP02538 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT6AP02538 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT6AP02538 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT6AP02538 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
KRT6AP02538 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT6AP02538 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.84■■□□□ 1.09
KRT6AP02538 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT6AP02538 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT6AP02538 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
KRT6AP02538 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT6AP02538 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT6AP02538 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT6AP02538 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT6AP02538 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT6AP02538 KRT8P33-201ENST00000508125 1423 ntBASIC21.83■■□□□ 1.09
KRT6AP02538 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT6AP02538 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT6AP02538 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT6AP02538 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
KRT6AP02538 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KRT6AP02538 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT6AP02538 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT6AP02538 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT6AP02538 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms