Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.28■□□□□ 0.68
TSPAN9O75954 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TSPAN9O75954 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 KRT8P33-201ENST00000508125 1423 ntBASIC19.28■□□□□ 0.68
TSPAN9O75954 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.28■□□□□ 0.68
TSPAN9O75954 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.28■□□□□ 0.68
TSPAN9O75954 AC103834.1-201ENST00000520383 144 ntBASIC19.28■□□□□ 0.68
TSPAN9O75954 MIR4508-201ENST00000584178 70 ntBASIC19.28■□□□□ 0.68
TSPAN9O75954 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TSPAN9O75954 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.28■□□□□ 0.68
TSPAN9O75954 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TSPAN9O75954 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN9O75954 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.27■□□□□ 0.68
TSPAN9O75954 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.27■□□□□ 0.68
TSPAN9O75954 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN9O75954 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN9O75954 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TSPAN9O75954 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN9O75954 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN9O75954 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.27■□□□□ 0.68
TSPAN9O75954 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN9O75954 PVT1_1.1-201ENST00000615125 194 ntBASIC19.27■□□□□ 0.68
TSPAN9O75954 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN9O75954 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TSPAN9O75954 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.27■□□□□ 0.68
TSPAN9O75954 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN9O75954 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TSPAN9O75954 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.27■□□□□ 0.67
TSPAN9O75954 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.27■□□□□ 0.67
TSPAN9O75954 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
TSPAN9O75954 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TSPAN9O75954 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TSPAN9O75954 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TSPAN9O75954 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TSPAN9O75954 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.26■□□□□ 0.67
TSPAN9O75954 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.26■□□□□ 0.67
TSPAN9O75954 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.26■□□□□ 0.67
TSPAN9O75954 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TSPAN9O75954 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TSPAN9O75954 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.26■□□□□ 0.67
TSPAN9O75954 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TSPAN9O75954 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.25■□□□□ 0.67
TSPAN9O75954 AC019171.1-201ENST00000601251 1056 ntBASIC19.25■□□□□ 0.67
TSPAN9O75954 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.25■□□□□ 0.67
TSPAN9O75954 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TSPAN9O75954 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TSPAN9O75954 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN9O75954 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN9O75954 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TSPAN9O75954 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN9O75954 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TSPAN9O75954 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TSPAN9O75954 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.24■□□□□ 0.67
TSPAN9O75954 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN9O75954 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TSPAN9O75954 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN9O75954 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN9O75954 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN9O75954 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TSPAN9O75954 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN9O75954 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TSPAN9O75954 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.23■□□□□ 0.67
TSPAN9O75954 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.23■□□□□ 0.67
TSPAN9O75954 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN9O75954 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TSPAN9O75954 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN9O75954 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN9O75954 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TSPAN9O75954 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN9O75954 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.22■□□□□ 0.67
TSPAN9O75954 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TSPAN9O75954 AC087393.1-201ENST00000582896 145 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms