Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 AC066615.1-201ENST00000640911 628 ntBASIC18.37■□□□□ 0.53
CUBNO60494 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CUBNO60494 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CUBNO60494 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CUBNO60494 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CUBNO60494 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CUBNO60494 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CUBNO60494 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CUBNO60494 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CUBNO60494 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CUBNO60494 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CUBNO60494 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CUBNO60494 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CUBNO60494 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CUBNO60494 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CUBNO60494 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.35■□□□□ 0.53
CUBNO60494 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.35■□□□□ 0.53
CUBNO60494 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CUBNO60494 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.35■□□□□ 0.53
CUBNO60494 CROCCP5-201ENST00000436658 830 ntBASIC18.35■□□□□ 0.53
CUBNO60494 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.35■□□□□ 0.53
CUBNO60494 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.34■□□□□ 0.53
CUBNO60494 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.34■□□□□ 0.53
CUBNO60494 BX842568.3-201ENST00000418104 571 ntBASIC18.34■□□□□ 0.53
CUBNO60494 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.34■□□□□ 0.53
CUBNO60494 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CUBNO60494 AC245100.8-202ENST00000629247 1058 ntBASIC18.34■□□□□ 0.53
CUBNO60494 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUBNO60494 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUBNO60494 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.34■□□□□ 0.53
CUBNO60494 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.34■□□□□ 0.53
CUBNO60494 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CUBNO60494 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CUBNO60494 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CUBNO60494 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.33■□□□□ 0.53
CUBNO60494 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CUBNO60494 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CUBNO60494 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.32■□□□□ 0.52
CUBNO60494 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.32■□□□□ 0.52
CUBNO60494 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.32■□□□□ 0.52
CUBNO60494 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CUBNO60494 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CUBNO60494 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CUBNO60494 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CUBNO60494 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CUBNO60494 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUBNO60494 MIR3181-201ENST00000578512 73 ntBASIC18.32■□□□□ 0.52
CUBNO60494 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CUBNO60494 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CUBNO60494 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CUBNO60494 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CUBNO60494 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.31■□□□□ 0.52
CUBNO60494 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CUBNO60494 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUBNO60494 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.31■□□□□ 0.52
CUBNO60494 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.31■□□□□ 0.52
CUBNO60494 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUBNO60494 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CUBNO60494 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.31■□□□□ 0.52
CUBNO60494 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.31■□□□□ 0.52
CUBNO60494 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CUBNO60494 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CUBNO60494 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CUBNO60494 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.3■□□□□ 0.52
CUBNO60494 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.3■□□□□ 0.52
CUBNO60494 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CUBNO60494 AC073111.5-205ENST00000641717 521 ntBASIC18.3■□□□□ 0.52
CUBNO60494 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CUBNO60494 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUBNO60494 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.29■□□□□ 0.52
CUBNO60494 MIR6084-201ENST00000622012 110 ntBASIC18.29■□□□□ 0.52
CUBNO60494 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.29■□□□□ 0.52
CUBNO60494 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.29■□□□□ 0.52
CUBNO60494 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CUBNO60494 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUBNO60494 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUBNO60494 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUBNO60494 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUBNO60494 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.29■□□□□ 0.52
CUBNO60494 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUBNO60494 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CUBNO60494 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUBNO60494 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CUBNO60494 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUBNO60494 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUBNO60494 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.28■□□□□ 0.52
CUBNO60494 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.28■□□□□ 0.52
CUBNO60494 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.28■□□□□ 0.52
CUBNO60494 AC092171.4-201ENST00000609130 632 ntBASIC18.28■□□□□ 0.52
CUBNO60494 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.28■□□□□ 0.52
CUBNO60494 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.28■□□□□ 0.52
CUBNO60494 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CUBNO60494 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.28■□□□□ 0.52
CUBNO60494 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.28■□□□□ 0.52
CUBNO60494 AC012414.1-201ENST00000556676 535 ntBASIC18.28■□□□□ 0.52
CUBNO60494 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CUBNO60494 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CUBNO60494 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUBNO60494 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CUBNO60494 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms