Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DLX3O60479 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DLX3O60479 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
DLX3O60479 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
DLX3O60479 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.28■■□□□ 1.16
DLX3O60479 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.28■■□□□ 1.16
DLX3O60479 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.28■■□□□ 1.16
DLX3O60479 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
DLX3O60479 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DLX3O60479 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
DLX3O60479 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.27■■□□□ 1.16
DLX3O60479 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DLX3O60479 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
DLX3O60479 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DLX3O60479 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.26■■□□□ 1.15
DLX3O60479 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DLX3O60479 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DLX3O60479 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
DLX3O60479 AC139795.1-202ENST00000500444 432 ntBASIC22.26■■□□□ 1.15
DLX3O60479 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DLX3O60479 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DLX3O60479 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DLX3O60479 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
DLX3O60479 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DLX3O60479 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
DLX3O60479 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.25■■□□□ 1.15
DLX3O60479 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
DLX3O60479 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DLX3O60479 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DLX3O60479 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DLX3O60479 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DLX3O60479 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DLX3O60479 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DLX3O60479 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DLX3O60479 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
DLX3O60479 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
DLX3O60479 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DLX3O60479 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.24■■□□□ 1.15
DLX3O60479 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.24■■□□□ 1.15
DLX3O60479 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DLX3O60479 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.24■■□□□ 1.15
DLX3O60479 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DLX3O60479 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DLX3O60479 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DLX3O60479 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
DLX3O60479 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DLX3O60479 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DLX3O60479 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
DLX3O60479 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DLX3O60479 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.23■■□□□ 1.15
DLX3O60479 AC120024.1-201ENST00000562672 995 ntBASIC22.23■■□□□ 1.15
DLX3O60479 NTF6A-201ENST00000591175 560 ntBASIC22.23■■□□□ 1.15
DLX3O60479 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.23■■□□□ 1.15
DLX3O60479 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DLX3O60479 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DLX3O60479 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DLX3O60479 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DLX3O60479 EP400NL-214ENST00000641289 2402 ntBASIC22.22■■□□□ 1.15
DLX3O60479 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.22■■□□□ 1.15
DLX3O60479 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DLX3O60479 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.22■■□□□ 1.15
DLX3O60479 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DLX3O60479 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.22■■□□□ 1.15
DLX3O60479 ABHD17AP5-201ENST00000580133 923 ntBASIC22.22■■□□□ 1.15
DLX3O60479 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DLX3O60479 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.21■■□□□ 1.15
DLX3O60479 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
DLX3O60479 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.21■■□□□ 1.15
DLX3O60479 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DLX3O60479 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.21■■□□□ 1.15
DLX3O60479 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
DLX3O60479 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DLX3O60479 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DLX3O60479 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
DLX3O60479 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DLX3O60479 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
DLX3O60479 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DLX3O60479 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DLX3O60479 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
DLX3O60479 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DLX3O60479 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.2■■□□□ 1.14
DLX3O60479 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
DLX3O60479 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DLX3O60479 AF131216.4-201ENST00000638924 1588 ntBASIC22.2■■□□□ 1.14
DLX3O60479 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DLX3O60479 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DLX3O60479 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.2■■□□□ 1.14
DLX3O60479 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.2■■□□□ 1.14
DLX3O60479 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DLX3O60479 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms