Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCMT2O60294 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCMT2O60294 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LCMT2O60294 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCMT2O60294 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LCMT2O60294 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.75■■□□□ 1.07
LCMT2O60294 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.75■■□□□ 1.07
LCMT2O60294 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCMT2O60294 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LCMT2O60294 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCMT2O60294 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCMT2O60294 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LCMT2O60294 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.74■■□□□ 1.07
LCMT2O60294 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.74■■□□□ 1.07
LCMT2O60294 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCMT2O60294 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.74■■□□□ 1.07
LCMT2O60294 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LCMT2O60294 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCMT2O60294 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LCMT2O60294 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.74■■□□□ 1.07
LCMT2O60294 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCMT2O60294 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCMT2O60294 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCMT2O60294 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCMT2O60294 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LCMT2O60294 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCMT2O60294 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LCMT2O60294 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.73■■□□□ 1.07
LCMT2O60294 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LCMT2O60294 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCMT2O60294 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCMT2O60294 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.72■■□□□ 1.07
LCMT2O60294 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCMT2O60294 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LCMT2O60294 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LCMT2O60294 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LCMT2O60294 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LCMT2O60294 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LCMT2O60294 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCMT2O60294 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LCMT2O60294 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCMT2O60294 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.71■■□□□ 1.07
LCMT2O60294 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LCMT2O60294 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LCMT2O60294 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCMT2O60294 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCMT2O60294 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LCMT2O60294 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.71■■□□□ 1.07
LCMT2O60294 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LCMT2O60294 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
LCMT2O60294 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LCMT2O60294 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LCMT2O60294 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LCMT2O60294 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LCMT2O60294 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.7■■□□□ 1.06
LCMT2O60294 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.7■■□□□ 1.06
LCMT2O60294 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.7■■□□□ 1.06
LCMT2O60294 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LCMT2O60294 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LCMT2O60294 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LCMT2O60294 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LCMT2O60294 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LCMT2O60294 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.69■■□□□ 1.06
LCMT2O60294 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LCMT2O60294 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.69■■□□□ 1.06
LCMT2O60294 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LCMT2O60294 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LCMT2O60294 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
LCMT2O60294 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.68■■□□□ 1.06
LCMT2O60294 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCMT2O60294 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LCMT2O60294 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LCMT2O60294 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.68■■□□□ 1.06
LCMT2O60294 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.68■■□□□ 1.06
LCMT2O60294 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCMT2O60294 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LCMT2O60294 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LCMT2O60294 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LCMT2O60294 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
LCMT2O60294 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LCMT2O60294 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LCMT2O60294 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LCMT2O60294 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LCMT2O60294 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.67■■□□□ 1.06
LCMT2O60294 AL117332.1-201ENST00000622628 974 ntBASIC21.67■■□□□ 1.06
LCMT2O60294 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LCMT2O60294 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCMT2O60294 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.66■■□□□ 1.06
LCMT2O60294 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
LCMT2O60294 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LCMT2O60294 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LCMT2O60294 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.66■■□□□ 1.06
LCMT2O60294 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCMT2O60294 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCMT2O60294 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.66■■□□□ 1.06
LCMT2O60294 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCMT2O60294 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.66■■□□□ 1.06
LCMT2O60294 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCMT2O60294 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.65■■□□□ 1.06
LCMT2O60294 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms