Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.46■□□□□ 0.71
PHF1O43189 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.46■□□□□ 0.71
PHF1O43189 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.46■□□□□ 0.71
PHF1O43189 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF1O43189 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF1O43189 AC021242.3-201ENST00000607598 1377 ntBASIC19.45■□□□□ 0.7
PHF1O43189 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PHF1O43189 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF1O43189 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PHF1O43189 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.45■□□□□ 0.7
PHF1O43189 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.45■□□□□ 0.7
PHF1O43189 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.45■□□□□ 0.7
PHF1O43189 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF1O43189 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF1O43189 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.45■□□□□ 0.7
PHF1O43189 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF1O43189 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PHF1O43189 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.44■□□□□ 0.7
PHF1O43189 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF1O43189 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF1O43189 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF1O43189 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF1O43189 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF1O43189 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHF1O43189 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHF1O43189 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF1O43189 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHF1O43189 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF1O43189 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF1O43189 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHF1O43189 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF1O43189 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF1O43189 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF1O43189 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHF1O43189 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHF1O43189 AC133561.4-201ENST00000566112 224 ntBASIC19.43■□□□□ 0.7
PHF1O43189 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.43■□□□□ 0.7
PHF1O43189 AC104564.3-201ENST00000582367 638 ntBASIC19.43■□□□□ 0.7
PHF1O43189 AC092028.1-203ENST00000608262 953 ntBASIC19.43■□□□□ 0.7
PHF1O43189 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF1O43189 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF1O43189 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PHF1O43189 AL117332.1-201ENST00000622628 974 ntBASIC19.43■□□□□ 0.7
PHF1O43189 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.43■□□□□ 0.7
PHF1O43189 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF1O43189 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PHF1O43189 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PHF1O43189 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF1O43189 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.42■□□□□ 0.7
PHF1O43189 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF1O43189 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF1O43189 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.42■□□□□ 0.7
PHF1O43189 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF1O43189 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.42■□□□□ 0.7
PHF1O43189 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF1O43189 AC090877.2-201ENST00000558441 1738 ntBASIC19.42■□□□□ 0.7
PHF1O43189 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF1O43189 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF1O43189 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF1O43189 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PHF1O43189 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.41■□□□□ 0.7
PHF1O43189 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF1O43189 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF1O43189 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF1O43189 ZNRF2P3-201ENST00000424200 374 ntBASIC19.41■□□□□ 0.7
PHF1O43189 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.41■□□□□ 0.7
PHF1O43189 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.41■□□□□ 0.7
PHF1O43189 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PHF1O43189 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.41■□□□□ 0.7
PHF1O43189 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PHF1O43189 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF1O43189 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHF1O43189 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.41■□□□□ 0.7
PHF1O43189 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF1O43189 DUSP8P5-201ENST00000422884 1815 ntBASIC19.4■□□□□ 0.7
PHF1O43189 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PHF1O43189 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF1O43189 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHF1O43189 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.4■□□□□ 0.7
PHF1O43189 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.4■□□□□ 0.7
PHF1O43189 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHF1O43189 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
PHF1O43189 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PHF1O43189 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PHF1O43189 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF1O43189 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.39■□□□□ 0.69
PHF1O43189 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.39■□□□□ 0.69
PHF1O43189 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF1O43189 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF1O43189 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.39■□□□□ 0.69
PHF1O43189 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.39■□□□□ 0.69
PHF1O43189 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.39■□□□□ 0.69
PHF1O43189 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF1O43189 AC004812.2-201ENST00000611079 2094 ntBASIC19.39■□□□□ 0.69
PHF1O43189 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PHF1O43189 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF1O43189 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHF1O43189 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PHF1O43189 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHF1O43189 MIR3621-201ENST00000580529 85 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms