Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NKX2-8O15522 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.13■□□□□ 0.97
NKX2-8O15522 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NKX2-8O15522 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NKX2-8O15522 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.12■□□□□ 0.97
NKX2-8O15522 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NKX2-8O15522 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NKX2-8O15522 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NKX2-8O15522 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.12■□□□□ 0.97
NKX2-8O15522 AC090192.1-201ENST00000517740 490 ntBASIC21.12■□□□□ 0.97
NKX2-8O15522 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
NKX2-8O15522 AL031602.1-201ENST00000633169 911 ntBASIC21.12■□□□□ 0.97
NKX2-8O15522 RARRES2P11-201ENST00000635158 484 ntBASIC21.12■□□□□ 0.97
NKX2-8O15522 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NKX2-8O15522 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NKX2-8O15522 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NKX2-8O15522 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NKX2-8O15522 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NKX2-8O15522 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
NKX2-8O15522 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NKX2-8O15522 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
NKX2-8O15522 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NKX2-8O15522 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NKX2-8O15522 TSPY26P-201ENST00000476365 1326 ntBASIC21.11■□□□□ 0.97
NKX2-8O15522 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NKX2-8O15522 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.11■□□□□ 0.97
NKX2-8O15522 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NKX2-8O15522 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.11■□□□□ 0.97
NKX2-8O15522 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
NKX2-8O15522 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NKX2-8O15522 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NKX2-8O15522 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
NKX2-8O15522 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.11■□□□□ 0.97
NKX2-8O15522 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NKX2-8O15522 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NKX2-8O15522 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NKX2-8O15522 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.1■□□□□ 0.97
NKX2-8O15522 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NKX2-8O15522 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.1■□□□□ 0.97
NKX2-8O15522 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NKX2-8O15522 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NKX2-8O15522 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.1■□□□□ 0.97
NKX2-8O15522 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.1■□□□□ 0.97
NKX2-8O15522 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.1■□□□□ 0.97
NKX2-8O15522 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NKX2-8O15522 DUSP8P4-201ENST00000399538 1761 ntBASIC21.1■□□□□ 0.97
NKX2-8O15522 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.1■□□□□ 0.97
NKX2-8O15522 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.09■□□□□ 0.97
NKX2-8O15522 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
NKX2-8O15522 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NKX2-8O15522 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NKX2-8O15522 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NKX2-8O15522 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.09■□□□□ 0.97
NKX2-8O15522 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.09■□□□□ 0.97
NKX2-8O15522 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.09■□□□□ 0.97
NKX2-8O15522 KRT18P5-201ENST00000436075 1291 ntBASIC21.09■□□□□ 0.97
NKX2-8O15522 YBX1P1-201ENST00000445822 960 ntBASIC21.09■□□□□ 0.97
NKX2-8O15522 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.09■□□□□ 0.97
NKX2-8O15522 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NKX2-8O15522 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.09■□□□□ 0.97
NKX2-8O15522 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.09■□□□□ 0.97
NKX2-8O15522 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.09■□□□□ 0.97
NKX2-8O15522 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NKX2-8O15522 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.09■□□□□ 0.97
NKX2-8O15522 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NKX2-8O15522 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NKX2-8O15522 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NKX2-8O15522 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NKX2-8O15522 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
NKX2-8O15522 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.08■□□□□ 0.97
NKX2-8O15522 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.08■□□□□ 0.97
NKX2-8O15522 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.08■□□□□ 0.97
NKX2-8O15522 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NKX2-8O15522 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NKX2-8O15522 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
NKX2-8O15522 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NKX2-8O15522 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX2-8O15522 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NKX2-8O15522 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX2-8O15522 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX2-8O15522 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.07■□□□□ 0.96
NKX2-8O15522 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX2-8O15522 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
NKX2-8O15522 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX2-8O15522 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
NKX2-8O15522 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX2-8O15522 SLC47A1P1-202ENST00000449666 945 ntBASIC21.07■□□□□ 0.96
NKX2-8O15522 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.07■□□□□ 0.96
NKX2-8O15522 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.07■□□□□ 0.96
NKX2-8O15522 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.07■□□□□ 0.96
NKX2-8O15522 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NKX2-8O15522 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX2-8O15522 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.06■□□□□ 0.96
NKX2-8O15522 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.06■□□□□ 0.96
NKX2-8O15522 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NKX2-8O15522 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKX2-8O15522 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKX2-8O15522 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.06■□□□□ 0.96
NKX2-8O15522 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.06■□□□□ 0.96
NKX2-8O15522 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms