Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC32.5■■■□□ 2.79
VGFO15240 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
VGFO15240 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
VGFO15240 GTSE1-AS1-202ENST00000623117 1518 ntBASIC32.5■■■□□ 2.79
VGFO15240 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
VGFO15240 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC32.49■■■□□ 2.79
VGFO15240 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC32.49■■■□□ 2.79
VGFO15240 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
VGFO15240 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC32.48■■■□□ 2.79
VGFO15240 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
VGFO15240 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC32.48■■■□□ 2.79
VGFO15240 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
VGFO15240 GRAMD4P2-201ENST00000423297 1097 ntBASIC32.48■■■□□ 2.79
VGFO15240 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
VGFO15240 ALDH1A3-203ENST00000557963 1670 ntBASIC32.47■■■□□ 2.79
VGFO15240 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
VGFO15240 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC32.47■■■□□ 2.79
VGFO15240 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
VGFO15240 GLI3-203ENST00000437480 451 ntTSL 2 BASIC32.46■■■□□ 2.79
VGFO15240 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC32.46■■■□□ 2.79
VGFO15240 pRNA.6-201ENST00000610482 90 ntBASIC32.46■■■□□ 2.79
VGFO15240 pRNA.5-201ENST00000612139 90 ntBASIC32.46■■■□□ 2.79
VGFO15240 pRNA.11-201ENST00000618423 90 ntBASIC32.46■■■□□ 2.79
VGFO15240 pRNA.13-201ENST00000619112 90 ntBASIC32.46■■■□□ 2.79
VGFO15240 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
VGFO15240 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC32.45■■■□□ 2.79
VGFO15240 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
VGFO15240 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
VGFO15240 AK1-201ENST00000223836 736 ntTSL 3 BASIC32.45■■■□□ 2.79
VGFO15240 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
VGFO15240 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC32.45■■■□□ 2.79
VGFO15240 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC32.45■■■□□ 2.79
VGFO15240 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC32.45■■■□□ 2.79
VGFO15240 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
VGFO15240 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
VGFO15240 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
VGFO15240 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
VGFO15240 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC32.45■■■□□ 2.78
VGFO15240 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC32.44■■■□□ 2.78
VGFO15240 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC32.44■■■□□ 2.78
VGFO15240 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
VGFO15240 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
VGFO15240 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC32.44■■■□□ 2.78
VGFO15240 SP2-202ENST00000613139 908 ntTSL 5 BASIC32.44■■■□□ 2.78
VGFO15240 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
VGFO15240 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
VGFO15240 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
VGFO15240 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
VGFO15240 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
VGFO15240 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
VGFO15240 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
VGFO15240 AC141586.4-201ENST00000624558 1573 ntBASIC32.42■■■□□ 2.78
VGFO15240 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC32.42■■■□□ 2.78
VGFO15240 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC32.42■■■□□ 2.78
VGFO15240 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
VGFO15240 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC32.41■■■□□ 2.78
VGFO15240 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
VGFO15240 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC32.41■■■□□ 2.78
VGFO15240 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC32.41■■■□□ 2.78
VGFO15240 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
VGFO15240 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
VGFO15240 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
VGFO15240 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
VGFO15240 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
VGFO15240 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC32.4■■■□□ 2.78
VGFO15240 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
VGFO15240 AC126544.1-201ENST00000580842 1059 ntBASIC32.39■■■□□ 2.78
VGFO15240 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC32.39■■■□□ 2.78
VGFO15240 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
VGFO15240 EI24-204ENST00000527235 1625 ntTSL 5 BASIC32.39■■■□□ 2.78
VGFO15240 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC32.39■■■□□ 2.78
VGFO15240 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC32.39■■■□□ 2.78
VGFO15240 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC32.38■■■□□ 2.77
VGFO15240 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC32.38■■■□□ 2.77
VGFO15240 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC32.38■■■□□ 2.77
VGFO15240 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC32.38■■■□□ 2.77
VGFO15240 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
VGFO15240 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC32.37■■■□□ 2.77
VGFO15240 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
VGFO15240 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC32.37■■■□□ 2.77
VGFO15240 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
VGFO15240 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
VGFO15240 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC32.36■■■□□ 2.77
VGFO15240 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
VGFO15240 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
VGFO15240 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC32.36■■■□□ 2.77
VGFO15240 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC32.35■■■□□ 2.77
VGFO15240 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
VGFO15240 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VGFO15240 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
VGFO15240 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VGFO15240 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC32.35■■■□□ 2.77
VGFO15240 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VGFO15240 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
VGFO15240 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.35■■■□□ 2.77
VGFO15240 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
VGFO15240 SLC47A1P1-202ENST00000449666 945 ntBASIC32.34■■■□□ 2.77
VGFO15240 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC32.33■■■□□ 2.77
VGFO15240 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC32.33■■■□□ 2.77
VGFO15240 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms