Protein–RNA interactions for Protein: O00213

APBB1, Amyloid-beta A4 precursor protein-binding family B member 1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB1O00213 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
APBB1O00213 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
APBB1O00213 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.22■■■□□ 2.11
APBB1O00213 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
APBB1O00213 GUSBP5-201ENST00000418136 578 ntBASIC28.22■■■□□ 2.11
APBB1O00213 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.22■■■□□ 2.11
APBB1O00213 MTDHP2-201ENST00000601468 714 ntBASIC28.22■■■□□ 2.11
APBB1O00213 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
APBB1O00213 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
APBB1O00213 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC28.21■■■□□ 2.11
APBB1O00213 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
APBB1O00213 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.21■■■□□ 2.11
APBB1O00213 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.21■■■□□ 2.11
APBB1O00213 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.21■■■□□ 2.11
APBB1O00213 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
APBB1O00213 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
APBB1O00213 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
APBB1O00213 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
APBB1O00213 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
APBB1O00213 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
APBB1O00213 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
APBB1O00213 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
APBB1O00213 AC010997.5-201ENST00000609182 354 ntBASIC28.2■■■□□ 2.1
APBB1O00213 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
APBB1O00213 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.2■■■□□ 2.1
APBB1O00213 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
APBB1O00213 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.2■■■□□ 2.1
APBB1O00213 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.2■■■□□ 2.1
APBB1O00213 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
APBB1O00213 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
APBB1O00213 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
APBB1O00213 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
APBB1O00213 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
APBB1O00213 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
APBB1O00213 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
APBB1O00213 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.19■■■□□ 2.1
APBB1O00213 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.19■■■□□ 2.1
APBB1O00213 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
APBB1O00213 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
APBB1O00213 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
APBB1O00213 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.19■■■□□ 2.1
APBB1O00213 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
APBB1O00213 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
APBB1O00213 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.18■■■□□ 2.1
APBB1O00213 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.18■■■□□ 2.1
APBB1O00213 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
APBB1O00213 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.17■■■□□ 2.1
APBB1O00213 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
APBB1O00213 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.17■■■□□ 2.1
APBB1O00213 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.17■■■□□ 2.1
APBB1O00213 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.17■■■□□ 2.1
APBB1O00213 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
APBB1O00213 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
APBB1O00213 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
APBB1O00213 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
APBB1O00213 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
APBB1O00213 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.16■■■□□ 2.1
APBB1O00213 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
APBB1O00213 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.16■■■□□ 2.1
APBB1O00213 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.16■■■□□ 2.1
APBB1O00213 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
APBB1O00213 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
APBB1O00213 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
APBB1O00213 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
APBB1O00213 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
APBB1O00213 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.15■■■□□ 2.1
APBB1O00213 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
APBB1O00213 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.15■■■□□ 2.1
APBB1O00213 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.15■■■□□ 2.1
APBB1O00213 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
APBB1O00213 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
APBB1O00213 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.14■■■□□ 2.1
APBB1O00213 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
APBB1O00213 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
APBB1O00213 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.14■■■□□ 2.1
APBB1O00213 KRT16P3-201ENST00000439127 1283 ntBASIC28.14■■■□□ 2.1
APBB1O00213 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.09
APBB1O00213 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
APBB1O00213 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
APBB1O00213 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.13■■■□□ 2.09
APBB1O00213 MIR6722-201ENST00000617286 78 ntBASIC28.13■■■□□ 2.09
APBB1O00213 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
APBB1O00213 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
APBB1O00213 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
APBB1O00213 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
APBB1O00213 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
APBB1O00213 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.12■■■□□ 2.09
APBB1O00213 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
APBB1O00213 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.11■■■□□ 2.09
APBB1O00213 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.11■■■□□ 2.09
APBB1O00213 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms