Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 MIR4281-201ENST00000580852 62 ntBASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 MTDHP2-201ENST00000601468 714 ntBASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.19■■□□□ 1.62
SPDYE4A6NLX3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SPDYE4A6NLX3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.18■■□□□ 1.62
SPDYE4A6NLX3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SPDYE4A6NLX3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SPDYE4A6NLX3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
SPDYE4A6NLX3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SPDYE4A6NLX3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SPDYE4A6NLX3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.18■■□□□ 1.62
SPDYE4A6NLX3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE4A6NLX3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SPDYE4A6NLX3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE4A6NLX3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.16■■□□□ 1.62
SPDYE4A6NLX3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE4A6NLX3 AC010997.5-201ENST00000609182 354 ntBASIC25.16■■□□□ 1.62
SPDYE4A6NLX3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE4A6NLX3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE4A6NLX3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SPDYE4A6NLX3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SPDYE4A6NLX3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SPDYE4A6NLX3 AL136116.3-201ENST00000402907 1138 ntBASIC25.15■■□□□ 1.62
SPDYE4A6NLX3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.15■■□□□ 1.62
SPDYE4A6NLX3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SPDYE4A6NLX3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPDYE4A6NLX3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.14■■□□□ 1.62
SPDYE4A6NLX3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SPDYE4A6NLX3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.14■■□□□ 1.62
SPDYE4A6NLX3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.14■■□□□ 1.62
SPDYE4A6NLX3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
SPDYE4A6NLX3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SPDYE4A6NLX3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.14■■□□□ 1.62
SPDYE4A6NLX3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SPDYE4A6NLX3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.14■■□□□ 1.61
SPDYE4A6NLX3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE4A6NLX3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 AC131281.2-201ENST00000520478 145 ntBASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 AL139246.5-201ENST00000606645 996 ntBASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE4A6NLX3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.11■■□□□ 1.61
SPDYE4A6NLX3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SPDYE4A6NLX3 MIR638-201ENST00000385237 100 ntBASIC25.11■■□□□ 1.61
SPDYE4A6NLX3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.11■■□□□ 1.61
SPDYE4A6NLX3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.11■■□□□ 1.61
SPDYE4A6NLX3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.11■■□□□ 1.61
SPDYE4A6NLX3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.11■■□□□ 1.61
SPDYE4A6NLX3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.11■■□□□ 1.61
SPDYE4A6NLX3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.11■■□□□ 1.61
SPDYE4A6NLX3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 AC120057.1-201ENST00000483947 663 ntBASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms