Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.98■□□□□ 0.95
SH3D21A4FU49 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3D21A4FU49 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.97■□□□□ 0.95
SH3D21A4FU49 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3D21A4FU49 AL356441.2-201ENST00000443009 864 ntBASIC20.97■□□□□ 0.95
SH3D21A4FU49 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3D21A4FU49 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3D21A4FU49 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.97■□□□□ 0.95
SH3D21A4FU49 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3D21A4FU49 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3D21A4FU49 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3D21A4FU49 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.96■□□□□ 0.95
SH3D21A4FU49 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SH3D21A4FU49 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.96■□□□□ 0.95
SH3D21A4FU49 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.96■□□□□ 0.95
SH3D21A4FU49 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3D21A4FU49 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3D21A4FU49 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SH3D21A4FU49 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SH3D21A4FU49 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3D21A4FU49 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3D21A4FU49 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SH3D21A4FU49 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3D21A4FU49 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3D21A4FU49 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SH3D21A4FU49 AC233723.2-201ENST00000623798 2106 ntBASIC20.95■□□□□ 0.94
SH3D21A4FU49 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3D21A4FU49 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3D21A4FU49 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3D21A4FU49 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SH3D21A4FU49 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.94■□□□□ 0.94
SH3D21A4FU49 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.94■□□□□ 0.94
SH3D21A4FU49 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3D21A4FU49 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SH3D21A4FU49 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3D21A4FU49 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3D21A4FU49 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3D21A4FU49 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3D21A4FU49 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SH3D21A4FU49 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH3D21A4FU49 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3D21A4FU49 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3D21A4FU49 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3D21A4FU49 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3D21A4FU49 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SH3D21A4FU49 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3D21A4FU49 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH3D21A4FU49 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3D21A4FU49 KRT125P-201ENST00000546827 989 ntBASIC20.93■□□□□ 0.94
SH3D21A4FU49 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.93■□□□□ 0.94
SH3D21A4FU49 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SH3D21A4FU49 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3D21A4FU49 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3D21A4FU49 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3D21A4FU49 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3D21A4FU49 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3D21A4FU49 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3D21A4FU49 BX664725.1-201ENST00000438252 379 ntBASIC20.92■□□□□ 0.94
SH3D21A4FU49 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3D21A4FU49 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.92■□□□□ 0.94
SH3D21A4FU49 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3D21A4FU49 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3D21A4FU49 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3D21A4FU49 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SH3D21A4FU49 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3D21A4FU49 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.91■□□□□ 0.94
SH3D21A4FU49 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SH3D21A4FU49 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3D21A4FU49 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH3D21A4FU49 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH3D21A4FU49 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.9■□□□□ 0.94
SH3D21A4FU49 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SH3D21A4FU49 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
SH3D21A4FU49 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SH3D21A4FU49 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.9■□□□□ 0.94
SH3D21A4FU49 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3D21A4FU49 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.9■□□□□ 0.94
SH3D21A4FU49 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH3D21A4FU49 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SH3D21A4FU49 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3D21A4FU49 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.89■□□□□ 0.93
SH3D21A4FU49 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3D21A4FU49 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3D21A4FU49 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3D21A4FU49 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SH3D21A4FU49 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3D21A4FU49 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3D21A4FU49 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.88■□□□□ 0.93
SH3D21A4FU49 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms