Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 HSPA8P5-201ENST00000456928 2069 ntBASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 LYPLA2P1-203ENST00000447689 696 ntBASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 AC079112.1-201ENST00000454972 939 ntBASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYNPO2Q9UMS6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 RNA5SP417-201ENST00000516459 108 ntBASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 KLF17P1-201ENST00000547105 1126 ntBASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 HERC2P11-201ENST00000562845 725 ntBASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 AC100756.2-201ENST00000569537 736 ntBASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 SNORD3B-1-201ENST00000577988 758 ntBASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 MIR6858-201ENST00000620733 67 ntBASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 AC068587.6-202ENST00000641839 5619 ntBASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 AC004554.1-201ENST00000422830 1468 ntBASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYNPO2Q9UMS6 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 KRT8P18-201ENST00000413425 1445 ntBASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPO2Q9UMS6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms