Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.64□□□□□ -0.39
CHMP1AQ9HD42 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHMP1AQ9HD42 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CHMP1AQ9HD42 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.64□□□□□ -0.39
CHMP1AQ9HD42 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.64□□□□□ -0.39
CHMP1AQ9HD42 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 SPDYE18-201ENST00000510091 1050 ntBASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 AC026410.3-201ENST00000514280 936 ntBASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 TPRX2P-201ENST00000535362 881 ntBASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 RARRES2P5-201ENST00000564013 466 ntBASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 AC093813.1-201ENST00000605066 256 ntBASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 AGGF1P1-201ENST00000509500 2073 ntBASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHMP1AQ9HD42 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 KRT8P14-201ENST00000414254 1442 ntBASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.62□□□□□ -0.39
CHMP1AQ9HD42 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms