Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 CLK3P2-201ENST00000427566 1453 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 TNRC18P1-201ENST00000502875 3650 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 HLA-K-203ENST00000430151 1046 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AC023141.5-201ENST00000458585 616 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 HLA-V-204ENST00000476601 1289 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 POLD2P1-201ENST00000511220 997 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 TIMM17BP1-201ENST00000545713 516 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AC010336.2-201ENST00000564226 506 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 MIR4469-201ENST00000583919 79 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 MYADML-201ENST00000474610 2147 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 BEND3P3-201ENST00000611030 2440 ntBASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SND1-IT1Q9HBX3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC9.79□□□□□ -0.84
SND1-IT1Q9HBX3 AL158070.2-201ENST00000623713 1621 ntBASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms