Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 DMBT1P1-203ENST00000636837 4628 ntBASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 AC104457.1-201ENST00000401024 814 ntBASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 KRT223P-202ENST00000449164 1292 ntBASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 KLF2P4-201ENST00000451959 1225 ntBASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 CTBP2P5-201ENST00000454986 1264 ntBASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1CQ9BQE3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 AC007551.1-201ENST00000457394 519 ntBASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 FTH1P14-201ENST00000482930 551 ntBASIC13.8□□□□□ -0.2
TUBA1CQ9BQE3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms