Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VRK1Q99986 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VRK1Q99986 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
VRK1Q99986 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.97□□□□□ -0.33
VRK1Q99986 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VRK1Q99986 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 MTHFR-210ENST00000641407 2387 ntBASIC12.97□□□□□ -0.33
VRK1Q99986 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 AC006001.1-201ENST00000325130 474 ntBASIC12.97□□□□□ -0.33
VRK1Q99986 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
VRK1Q99986 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
VRK1Q99986 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.97□□□□□ -0.33
VRK1Q99986 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.97□□□□□ -0.33
VRK1Q99986 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.97□□□□□ -0.33
VRK1Q99986 RPL13AP20-201ENST00000459725 609 ntBASIC12.97□□□□□ -0.33
VRK1Q99986 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.97□□□□□ -0.33
VRK1Q99986 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.97□□□□□ -0.33
VRK1Q99986 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.97□□□□□ -0.33
VRK1Q99986 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.97□□□□□ -0.33
VRK1Q99986 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.97□□□□□ -0.33
VRK1Q99986 AC091271.1-201ENST00000611877 1162 ntBASIC12.97□□□□□ -0.33
VRK1Q99986 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.97□□□□□ -0.33
VRK1Q99986 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.97□□□□□ -0.33
VRK1Q99986 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.97□□□□□ -0.33
VRK1Q99986 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.97□□□□□ -0.33
VRK1Q99986 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 AC113367.3-201ENST00000508316 1912 ntBASIC12.97□□□□□ -0.33
VRK1Q99986 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.97□□□□□ -0.33
VRK1Q99986 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VRK1Q99986 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 CICP11-201ENST00000434745 2827 ntBASIC12.97□□□□□ -0.33
VRK1Q99986 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VRK1Q99986 AC011474.4-201ENST00000623523 2076 ntBASIC12.97□□□□□ -0.33
VRK1Q99986 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
VRK1Q99986 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.96□□□□□ -0.33
VRK1Q99986 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VRK1Q99986 AC152010.1-201ENST00000415779 2006 ntBASIC12.96□□□□□ -0.33
VRK1Q99986 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VRK1Q99986 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.96□□□□□ -0.33
VRK1Q99986 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
VRK1Q99986 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VRK1Q99986 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VRK1Q99986 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.96□□□□□ -0.33
VRK1Q99986 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VRK1Q99986 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VRK1Q99986 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
VRK1Q99986 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.96□□□□□ -0.33
VRK1Q99986 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VRK1Q99986 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.96□□□□□ -0.33
VRK1Q99986 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.96□□□□□ -0.33
VRK1Q99986 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.96□□□□□ -0.33
VRK1Q99986 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VRK1Q99986 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VRK1Q99986 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.96□□□□□ -0.33
VRK1Q99986 AC022616.1-201ENST00000518688 554 ntBASIC12.96□□□□□ -0.33
VRK1Q99986 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
VRK1Q99986 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.96□□□□□ -0.33
VRK1Q99986 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.96□□□□□ -0.33
VRK1Q99986 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.96□□□□□ -0.33
VRK1Q99986 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VRK1Q99986 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.96□□□□□ -0.33
VRK1Q99986 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.96□□□□□ -0.33
VRK1Q99986 MIR4741-201ENST00000579822 90 ntBASIC12.96□□□□□ -0.33
VRK1Q99986 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VRK1Q99986 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.96□□□□□ -0.33
VRK1Q99986 AC006453.4-201ENST00000636949 1252 ntBASIC12.96□□□□□ -0.33
VRK1Q99986 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
VRK1Q99986 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VRK1Q99986 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
VRK1Q99986 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
VRK1Q99986 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VRK1Q99986 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VRK1Q99986 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
VRK1Q99986 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms