Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 AC092573.1-201ENST00000433054 884 ntBASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 RN7SL396P-201ENST00000471086 295 ntBASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 TCAM1P-207ENST00000485295 1537 ntBASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP2Q96SN8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 AC007191.1-201ENST00000623179 2995 ntBASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 AC114501.1-201ENST00000445949 172 ntBASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 MIR6756-201ENST00000616240 63 ntBASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5RAP2Q96SN8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 Z69890.1-201ENST00000382990 339 ntBASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 MIR4472-1-201ENST00000584349 80 ntBASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AC127024.7-201ENST00000625101 200 ntBASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AL590824.1-201ENST00000403828 1349 ntBASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5RAP2Q96SN8 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 AC138761.6-201ENST00000583997 1423 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms