Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
AP1S3Q96PC3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 AC023274.1-201ENST00000418278 595 ntBASIC11.07□□□□□ -0.64
AP1S3Q96PC3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 MKNK2P1-201ENST00000437526 628 ntBASIC11.07□□□□□ -0.64
AP1S3Q96PC3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 AC022447.6-201ENST00000515522 438 ntBASIC11.07□□□□□ -0.64
AP1S3Q96PC3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 RN7SL828P-201ENST00000607615 303 ntBASIC11.07□□□□□ -0.64
AP1S3Q96PC3 C20orf181-201ENST00000623918 480 ntBASIC11.07□□□□□ -0.64
AP1S3Q96PC3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
AP1S3Q96PC3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms