Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 RN7SL767P-201ENST00000493013 295 ntBASIC15.28■□□□□ 0.04
CASD1Q96PB1 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 AL512310.5-201ENST00000551999 515 ntBASIC15.28■□□□□ 0.04
CASD1Q96PB1 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CASD1Q96PB1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CASD1Q96PB1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CASD1Q96PB1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.27■□□□□ 0.04
CASD1Q96PB1 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CASD1Q96PB1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CASD1Q96PB1 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CASD1Q96PB1 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 GCSHP3-201ENST00000431120 391 ntBASIC15.27■□□□□ 0.04
CASD1Q96PB1 CHCHD2P2-201ENST00000503744 321 ntBASIC15.27■□□□□ 0.04
CASD1Q96PB1 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 AC093826.1-201ENST00000508655 993 ntBASIC15.27■□□□□ 0.04
CASD1Q96PB1 IGHV1-12-201ENST00000518307 205 ntBASIC15.27■□□□□ 0.04
CASD1Q96PB1 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 RN7SL455P-201ENST00000580629 282 ntBASIC15.27■□□□□ 0.04
CASD1Q96PB1 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 AC005357.2-202ENST00000590507 1060 ntBASIC15.27■□□□□ 0.04
CASD1Q96PB1 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.27■□□□□ 0.04
CASD1Q96PB1 AC011471.3-201ENST00000623576 402 ntBASIC15.27■□□□□ 0.04
CASD1Q96PB1 AC138466.4-201ENST00000623965 852 ntBASIC15.27■□□□□ 0.04
CASD1Q96PB1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.27■□□□□ 0.03
CASD1Q96PB1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CASD1Q96PB1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASD1Q96PB1 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.27■□□□□ 0.03
CASD1Q96PB1 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 SNORD3B-1-201ENST00000577988 758 ntBASIC15.26■□□□□ 0.03
CASD1Q96PB1 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 AP005264.5-201ENST00000590066 467 ntBASIC15.26■□□□□ 0.03
CASD1Q96PB1 AL118522.1-201ENST00000611368 560 ntBASIC15.26■□□□□ 0.03
CASD1Q96PB1 AC091769.1-201ENST00000619576 568 ntBASIC15.26■□□□□ 0.03
CASD1Q96PB1 FO393412.1-201ENST00000619841 382 ntBASIC15.26■□□□□ 0.03
CASD1Q96PB1 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 AC019109.1-201ENST00000401725 1874 ntBASIC15.26■□□□□ 0.03
CASD1Q96PB1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASD1Q96PB1 RPL13AP3-202ENST00000494676 1473 ntBASIC15.26■□□□□ 0.03
CASD1Q96PB1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CASD1Q96PB1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms