Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL031595.1-201ENST00000623969 4709 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AC215219.1-201ENST00000400706 1817 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL662890.1-201ENST00000396818 632 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 KRT18P36-201ENST00000411618 1276 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 CYP46A4P-201ENST00000414953 267 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 SLC25A24P2-201ENST00000415059 510 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AC006335.1-201ENST00000445200 547 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 PGAM1P5-201ENST00000548011 764 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AC021016.3-201ENST00000608367 477 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL591471.1-201ENST00000621855 229 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 INTS4P1-203ENST00000641008 3683 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL390755.1-201ENST00000623716 2027 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AC068418.2-201ENST00000577309 3703 ntBASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 CICP24-201ENST00000605464 2705 ntBASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2E2Q96LR5 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms