Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 BEND3P1-201ENST00000421591 1944 ntBASIC12.76□□□□□ -0.37
TMEM54Q969K7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 DPM3-202ENST00000368399 517 ntBASIC12.75□□□□□ -0.37
TMEM54Q969K7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 AC018735.1-201ENST00000437208 1502 ntBASIC12.75□□□□□ -0.37
TMEM54Q969K7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 CCT8L1P-201ENST00000465400 1674 ntBASIC12.75□□□□□ -0.37
TMEM54Q969K7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 AC140658.4-201ENST00000561990 352 ntBASIC12.75□□□□□ -0.37
TMEM54Q969K7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 AL033527.4-201ENST00000641026 673 ntBASIC12.75□□□□□ -0.37
TMEM54Q969K7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM54Q969K7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TMEM54Q969K7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 AC041040.2-201ENST00000622926 2899 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms