Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXR1Q6PIV2 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 GOLGA2P5-201ENST00000266746 2395 ntBASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 BRWD1P1-201ENST00000401091 371 ntBASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 KLF2P4-201ENST00000451959 1225 ntBASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 AC243562.2-201ENST00000561247 970 ntBASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 GPR182-203ENST00000622922 591 ntBASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXR1Q6PIV2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 DNM1P41-201ENST00000623634 3350 ntBASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 HIST3H2BA-201ENST00000436555 524 ntBASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 SLC25A47P1-201ENST00000531577 414 ntBASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 AC233724.13-201ENST00000598383 410 ntBASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms