Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 AL022334.2-201ENST00000610000 484 ntBASIC15.42■□□□□ 0.06
VARS2Q5ST30 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.42■□□□□ 0.06
VARS2Q5ST30 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 MTHFR-210ENST00000641407 2387 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 CICP14-201ENST00000629111 2732 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 MTCYBP15-201ENST00000433123 1127 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 RN7SL530P-201ENST00000485097 298 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 SRPK2P-201ENST00000523408 1100 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 BNIP3P35-201ENST00000604530 490 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 AC051619.9-201ENST00000623237 597 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 AC099063.4-201ENST00000641099 1602 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 FGD5P1-202ENST00000614866 2498 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 MYADML-201ENST00000474610 2147 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 KRT18P9-201ENST00000604826 1300 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARS2Q5ST30 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 AP002353.1-201ENST00000528257 1599 ntBASIC15.41■□□□□ 0.06
VARS2Q5ST30 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VARS2Q5ST30 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms