Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.23□□□□□ -0.13
CDK3Q00526 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.23□□□□□ -0.13
CDK3Q00526 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 DUX4L50-201ENST00000455245 715 ntBASIC14.23□□□□□ -0.13
CDK3Q00526 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.23□□□□□ -0.13
CDK3Q00526 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.23□□□□□ -0.13
CDK3Q00526 AC008723.1-201ENST00000506922 207 ntBASIC14.23□□□□□ -0.13
CDK3Q00526 RNA5SP423-201ENST00000517127 109 ntBASIC14.23□□□□□ -0.13
CDK3Q00526 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.23□□□□□ -0.13
CDK3Q00526 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.23□□□□□ -0.13
CDK3Q00526 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.23□□□□□ -0.13
CDK3Q00526 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.23□□□□□ -0.13
CDK3Q00526 LINC01783-202ENST00000614408 828 ntBASIC14.23□□□□□ -0.13
CDK3Q00526 BX284668.2-205ENST00000619677 828 ntBASIC14.23□□□□□ -0.13
CDK3Q00526 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.23□□□□□ -0.13
CDK3Q00526 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.23□□□□□ -0.13
CDK3Q00526 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.23□□□□□ -0.13
CDK3Q00526 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CDK3Q00526 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.23□□□□□ -0.13
CDK3Q00526 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 OR2I1P-209ENST00000641730 5365 ntBASIC14.23□□□□□ -0.13
CDK3Q00526 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CDK3Q00526 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDK3Q00526 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.22□□□□□ -0.13
CDK3Q00526 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDK3Q00526 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDK3Q00526 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.22□□□□□ -0.13
CDK3Q00526 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.22□□□□□ -0.13
CDK3Q00526 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CDK3Q00526 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CDK3Q00526 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.22□□□□□ -0.13
CDK3Q00526 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 AC234782.1-201ENST00000451950 919 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.22□□□□□ -0.13
CDK3Q00526 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.22□□□□□ -0.13
CDK3Q00526 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CDK3Q00526 AC093752.3-201ENST00000567343 901 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 AC026803.1-201ENST00000569130 274 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 PHBP15-201ENST00000574228 665 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 MIR3907-201ENST00000579424 151 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
CDK3Q00526 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.22□□□□□ -0.13
CDK3Q00526 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 AC015967.2-201ENST00000624092 234 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 AC006435.4-201ENST00000625037 234 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 AL356737.1-201ENST00000634391 234 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.22□□□□□ -0.13
CDK3Q00526 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 TBC1D3J-201ENST00000620719 1426 ntBASIC14.22□□□□□ -0.13
CDK3Q00526 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.22□□□□□ -0.13
CDK3Q00526 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.22□□□□□ -0.13
CDK3Q00526 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDK3Q00526 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.21□□□□□ -0.13
CDK3Q00526 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.21□□□□□ -0.13
CDK3Q00526 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms