Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 DUX4L45-201ENST00000566406 1057 ntBASIC13.74□□□□□ -0.21
RAE1P78406 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.74□□□□□ -0.21
RAE1P78406 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.74□□□□□ -0.21
RAE1P78406 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 AC144522.1-201ENST00000625111 1658 ntBASIC13.74□□□□□ -0.21
RAE1P78406 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.74□□□□□ -0.21
RAE1P78406 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.74□□□□□ -0.21
RAE1P78406 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RAE1P78406 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.73□□□□□ -0.21
RAE1P78406 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAE1P78406 AL928654.5-201ENST00000624831 2501 ntBASIC13.73□□□□□ -0.21
RAE1P78406 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.73□□□□□ -0.21
RAE1P78406 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.73□□□□□ -0.21
RAE1P78406 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.73□□□□□ -0.21
RAE1P78406 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RAE1P78406 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.73□□□□□ -0.21
RAE1P78406 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RAE1P78406 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.73□□□□□ -0.21
RAE1P78406 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.73□□□□□ -0.21
RAE1P78406 AC006122.1-201ENST00000493323 440 ntBASIC13.73□□□□□ -0.21
RAE1P78406 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.73□□□□□ -0.21
RAE1P78406 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.73□□□□□ -0.21
RAE1P78406 AC003686.1-201ENST00000550956 1034 ntBASIC13.73□□□□□ -0.21
RAE1P78406 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.73□□□□□ -0.21
RAE1P78406 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAE1P78406 AC124068.2-201ENST00000569473 1109 ntBASIC13.73□□□□□ -0.21
RAE1P78406 EEF1DP1-201ENST00000585891 896 ntBASIC13.73□□□□□ -0.21
RAE1P78406 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.73□□□□□ -0.21
RAE1P78406 AC021016.3-201ENST00000608367 477 ntBASIC13.73□□□□□ -0.21
RAE1P78406 AL035252.4-201ENST00000624174 288 ntBASIC13.73□□□□□ -0.21
RAE1P78406 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.73□□□□□ -0.21
RAE1P78406 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RAE1P78406 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.73□□□□□ -0.21
RAE1P78406 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RAE1P78406 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
RAE1P78406 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAE1P78406 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAE1P78406 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RAE1P78406 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
RAE1P78406 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAE1P78406 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
RAE1P78406 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.72□□□□□ -0.21
RAE1P78406 AC005034.1-201ENST00000426657 489 ntBASIC13.72□□□□□ -0.21
RAE1P78406 AC022210.1-201ENST00000449856 793 ntBASIC13.72□□□□□ -0.21
RAE1P78406 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.72□□□□□ -0.21
RAE1P78406 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.72□□□□□ -0.21
RAE1P78406 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.72□□□□□ -0.21
RAE1P78406 HILS1-202ENST00000545329 423 ntBASIC13.72□□□□□ -0.21
RAE1P78406 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms