Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
AP3S2P59780 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.52□□□□□ -0.4
AP3S2P59780 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S2P59780 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S2P59780 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.52□□□□□ -0.4
AP3S2P59780 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
AP3S2P59780 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
AP3S2P59780 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
AP3S2P59780 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.52□□□□□ -0.4
AP3S2P59780 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.52□□□□□ -0.4
AP3S2P59780 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S2P59780 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.52□□□□□ -0.4
AP3S2P59780 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.52□□□□□ -0.4
AP3S2P59780 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
AP3S2P59780 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S2P59780 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.52□□□□□ -0.4
AP3S2P59780 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S2P59780 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.52□□□□□ -0.41
AP3S2P59780 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.52□□□□□ -0.41
AP3S2P59780 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.52□□□□□ -0.41
AP3S2P59780 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 NUS1P3-201ENST00000423502 862 ntBASIC12.52□□□□□ -0.41
AP3S2P59780 FAM58CP-201ENST00000435741 640 ntBASIC12.52□□□□□ -0.41
AP3S2P59780 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.52□□□□□ -0.41
AP3S2P59780 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 TIMM8BP1-201ENST00000452384 211 ntBASIC12.52□□□□□ -0.41
AP3S2P59780 EMBP1-201ENST00000458200 901 ntBASIC12.52□□□□□ -0.41
AP3S2P59780 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.52□□□□□ -0.41
AP3S2P59780 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.52□□□□□ -0.41
AP3S2P59780 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 AL079307.3-201ENST00000556114 283 ntBASIC12.52□□□□□ -0.41
AP3S2P59780 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 LINC01115-203ENST00000606068 577 ntBASIC12.52□□□□□ -0.41
AP3S2P59780 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.52□□□□□ -0.41
AP3S2P59780 AC092902.6-201ENST00000641783 218 ntBASIC12.52□□□□□ -0.41
AP3S2P59780 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.52□□□□□ -0.41
AP3S2P59780 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S2P59780 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S2P59780 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
AP3S2P59780 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
AP3S2P59780 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
AP3S2P59780 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
AP3S2P59780 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.51□□□□□ -0.41
AP3S2P59780 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 AL353779.1-201ENST00000434793 351 ntBASIC12.51□□□□□ -0.41
AP3S2P59780 AC069335.1-201ENST00000489972 472 ntBASIC12.51□□□□□ -0.41
AP3S2P59780 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
AP3S2P59780 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.51□□□□□ -0.41
AP3S2P59780 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms